| No alignment |
| Site name: | AA371876_47_2594 |
|---|
| Site flanking region: | ATATTTTTGTGTGTGTGTCTTTAATTCCTCTAGCGCTGCTGAGTTAGTGACCGAGCTGGTCTCGGCAGAG
GTGGGCGGGTCTTTTGAGTTCAGGAGTTCAaGAGCAGCCTGGCCAACATGGTGAAACCCCTTCTCTACTA
AAAATATGAAAATTATCCGGGCATGGTGGTGTGCCTCTGTACTTTCAGCTACTCAGGAAGC |
|---|
| Alignment of AA371876_47_2594 to gnl|alu|HSU14573 |
85 tgagttcaggagttcaagagcagcctggccaacatggtgaaaccccttctctactaaaaa 144
|||| |||||||||| ||| |||||||||||||||||||||||||| |||||||||||||
66 tgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaa 125
145 tatgaaaattatccgggcatggtgg 169
|| ||||||| |||||| ||||||
126 tacaaaaattagccgggcgtggtgg 150
| Site name: | AA371876_47_2618 |
|---|
| Site flanking region: | TTCCTCTAGCGCTGCTGAGTTAGTGACCGAGCTGGTCTCGGCAGAGGTGGGCGGGTCTTTTGAGTTCAGG
AGTTCAAGAGCAGCCTGGCCAACATGGTGAaACCCCTTCTCTACTAAAAATATGAAAATTATCCGGGCAT
GGTGGTGTGCCTCTGTACTTTCAGCTACTCAGGAAGCTGAGGCACAAGAATTGCTGGAACA |
|---|
| Alignment of AA371876_47_2618 to gnl|alu|HSU14573 |
61 tgagttcaggagttcaagagcagcctggccaacatggtgaaaccccttctctactaaaaa 120
|||| |||||||||| ||| |||||||||||||||||||||||||| |||||||||||||
66 tgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaa 125
121 tatgaaaattatccgggcatggtggtgtgcctctgtactttcagctactcaggaagctga 180
|| ||||||| |||||| |||||| | || ||||| | ||||||||| ||| |||||
126 tacaaaaattagccgggcgtggtggcgggcgcctgtaatcccagctactcgggaggctga 185
181 ggca 184
||||
186 ggca 189
| Site name: | AA371876_47_2619 |
|---|
| Site flanking region: | TCCTCTAGCGCTGCTGAGTTAGTGACCGAGCTGGTCTCGGCAGAGGTGGGCGGGTCTTTTGAGTTCAGGA
GTTCAAGAGCAGCCTGGCCAACATGGTGAAaCCCCTTCTCTACTAAAAATATGAAAATTATCCGGGCATG
GTGGTGTGCCTCTGTACTTTCAGCTACTCAGGAAGCTGAGGCACAAGAATTGCTGGAACAT |
|---|
| Alignment of AA371876_47_2619 to gnl|alu|HSU14573 |
60 tgagttcaggagttcaagagcagcctggccaacatggtgaaaccccttctctactaaaaa 119
|||| |||||||||| ||| |||||||||||||||||||||||||| |||||||||||||
66 tgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaa 125
120 tatgaaaattatccgggcatggtggtgtgcctctgtactttcagctactcaggaagctga 179
|| ||||||| |||||| |||||| | || ||||| | ||||||||| ||| |||||
126 tacaaaaattagccgggcgtggtggcgggcgcctgtaatcccagctactcgggaggctga 185
180 ggca 183
||||
186 ggca 189
| Site name: | AA371876_47_2633 |
|---|
| Site flanking region: | TGAGTTAGTGACCGAGCTGGTCTCGGCAGAGGTGGGCGGGTCTTTTGAGTTCAGGAGTTCAAGAGCAGCC
TGGCCAACATGGTGAAACCCCTTCTCTACTaAAAATATGAAAATTATCCGGGCATGGTGGTGTGCCTCTG
TACTTTCAGCTACTCAGGAAGCTGAGGCACAAGAATTGCTGGAACATGGGAGGTGGAGGCT |
|---|
| Alignment of AA371876_47_2633 to gnl|alu|Z15030_HSAL001064 |
48 agttcaggagttcaagagcagcctggccaacatggtgaaaccccttctctactaaaaata 107
||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||
68 agttcaggagttcaagaccagcctggccaacatggtgaagccccgtctctactaaaaata 127
108 tgaaaattatccgggcatggtggtgtgcctctgtactttcagctactcaggaagctgagg 167
||||||| | ||| |||||| ||| ||||| | |||||||| ||| |||||||
128 caaaaattagctgggtgtggtggcatgcacctgtaatcccagctacttgggaggctgagg 187
168 cacaagaattgctggaacatgggagg 193
|| |||||||||| |||| |||||||
188 cagaagaattgcttgaacctgggagg 213
| Site name: | AA371876_47_2634 |
|---|
| Site flanking region: | GAGTTAGTGACCGAGCTGGTCTCGGCAGAGGTGGGCGGGTCTTTTGAGTTCAGGAGTTCAAGAGCAGCCT
GGCCAACATGGTGAAACCCCTTCTCTACTAaAAATATGAAAATTATCCGGGCATGGTGGTGTGCCTCTGT
ACTTTCAGCTACTCAGGAAGCTGAGGCACAAGAATTGCTGGAACATGGGAGGTGGAGGCTG |
|---|
| Alignment of AA371876_47_2634 to gnl|alu|Z15030_HSAL001064 |
47 agttcaggagttcaagagcagcctggccaacatggtgaaaccccttctctactaaaaata 106
||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||
68 agttcaggagttcaagaccagcctggccaacatggtgaagccccgtctctactaaaaata 127
107 tgaaaattatccgggcatggtggtgtgcctctgtactttcagctactcaggaagctgagg 166
||||||| | ||| |||||| ||| ||||| | |||||||| ||| |||||||
128 caaaaattagctgggtgtggtggcatgcacctgtaatcccagctacttgggaggctgagg 187
167 cacaagaattgctggaacatgggagg 192
|| |||||||||| |||| |||||||
188 cagaagaattgcttgaacctgggagg 213
| Site name: | AA371876_47_2644 |
|---|
| Site flanking region: | CCGAGCTGGTCTCGGCAGAGGTGGGCGGGTCTTTTGAGTTCAGGAGTTCAAGAGCAGCCTGGCCAACATG
GTGAAACCCCTTCTCTACTAAAAATATGAAaATTATCCGGGCATGGTGGTGTGCCTCTGTACTTTCAGCT
ACTCAGGAAGCTGAGGCACAAGAATTGCTGGAACATGGGAGGTGGAGGCTGCAGTGAGCTG |
|---|
| Alignment of AA371876_47_2644 to gnl|alu|HSU14573 |
35 tgagttcaggagttcaagagcagcctggccaacatggtgaaaccccttctctactaaaaa 94
|||| |||||||||| ||| |||||||||||||||||||||||||| |||||||||||||
66 tgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaa 125
95 tatgaaaattatccgggcatggtggtgtgcctctgtactttcagctactcaggaagctga 154
|| ||||||| |||||| |||||| | || ||||| | ||||||||| ||| |||||
126 tacaaaaattagccgggcgtggtggcgggcgcctgtaatcccagctactcgggaggctga 185
155 ggcacaagaattgctggaacatgggaggtggaggctgcagtgagc 199
|||| ||||| ||| |||| |||||| ||||| ||||||||||
186 ggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagc 230
| Site name: | AA371876_47_2648 |
|---|
| Site flanking region: | GCTGGTCTCGGCAGAGGTGGGCGGGTCTTTTGAGTTCAGGAGTTCAAGAGCAGCCTGGCCAACATGGTGA
AACCCCTTCTCTACTAAAAATATGAAAATTaTCCGGGCATGGTGGTGTGCCTCTGTACTTTCAGCTACTC
AGGAAGCTGAGGCACAAGAATTGCTGGAACATGGGAGGTGGAGGCTGCAGTGAGCTGAGAT |
|---|
| Alignment of AA371876_47_2648 to gnl|alu|HSU14573 |
31 tgagttcaggagttcaagagcagcctggccaacatggtgaaaccccttctctactaaaaa 90
|||| |||||||||| ||| |||||||||||||||||||||||||| |||||||||||||
66 tgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaa 125
91 tatgaaaattatccgggcatggtggtgtgcctctgtactttcagctactcaggaagctga 150
|| ||||||| |||||| |||||| | || ||||| | ||||||||| ||| |||||
126 tacaaaaattagccgggcgtggtggcgggcgcctgtaatcccagctactcgggaggctga 185
151 ggcacaagaattgctggaacatgggaggtggaggctgcagtgagctgagat 201
|||| ||||| ||| |||| |||||| ||||| |||||||||| |||||
186 ggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccgagat 236
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | AB014607 |
|---|
| Multiple alignment | TCTAGCGCTGCTGAGTTAGTGACCGAGCTGGTCTCGGCAGAGGTGGGCGGGTCTTTTGAG Chrom.1 NT_032977
TCTAGCGCTGCTGAGTTAGTGACCGAGCTGGTCTCGGCAGGGGTGGGCGGGTCTTTTGAG AB014607
TTCAGGAGTTCAAGAGCAGCCTGGCCAACATGGTGAAACCCCTTCTCTACTAAAAATATG Chrom.1 NT_032977
TTCAGGAGTTCAGGAGCAGCCTGGCCAACATGGTGAGGCCCCTTCTCTACTGGAAATATG AB014607
AAAATTATCCGGGCATGGTGGTGTGCCTCTGTACTTTCAGCTACTCA Chrom.1 NT_032977
AAGATTGTCCGGGCATGGTGGTGTGCCTCTGTACTTTCAGCTACTCG AB014607
|
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|
| Sites: | AA371876_47_2688 AA371876_47_2697 AA371876_47_2716 AA371876_47_2740 AA371876_47_2750 AA371876_47_2770 AA371876_47_2774 Cytogenetic band: 1p32.2 |
|---|
| Site name: | AA371876_47_2688 |
|---|
| Site flanking region: | AGTTCAAGAGCAGCCTGGCCAACATGGTGAAACCCCTTCTCTACTAAAAATATGAAAATTATCCGGGCAT
GGTGGTGTGCCTCTGTACTTTCAGCTACTCaGGAAGCTGAGGCACAAGAATTGCTGGAACATGGGAGGTG
GAGGCTGCAGTGAGCTGAGATCATGCCACTGCACTCCAGCCCAGGCAATAGAGTAAGACTC |
|---|
| Alignment of AA371876_47_2688 to gnl|alu|HSU14573 |
1 agttcaagagcagcctggccaacatggtgaaaccccttctctactaaaaatatgaaaatt 60
||||| ||| |||||||||||||||||||||||||| ||||||||||||||| ||||||
76 agttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaatt 135
61 atccgggcatggtggtgtgcctctgtactttcagctactcaggaagctgaggcacaagaa 120
| |||||| |||||| | || ||||| | ||||||||| ||| ||||||||| ||||
136 agccgggcgtggtggcgggcgcctgtaatcccagctactcgggaggctgaggcaggagaa 195
121 ttgctggaacatgggaggtggaggctgcagtgagctgagatcatgccactgcactccagc 180
| ||| |||| |||||| ||||| |||||||||| |||||| ||||||||||||||||
196 tcgcttgaacccgggaggcggaggttgcagtgagccgagatcgcgccactgcactccagc 255
181 c 181
|
256 c 256
| Site name: | AA371876_47_2697 |
|---|
| Site flanking region: | GCAGCCTGGCCAACATGGTGAAACCCCTTCTCTACTAAAAATATGAAAATTATCCGGGCATGGTGGTGTG
CCTCTGTACTTTCAGCTACTCAGGAAGCTGaGGCACAAGAATTGCTGGAACATGGGAGGTGGAGGCTGCA
GTGAGCTGAGATCATGCCACTGCACTCCAGCCCAGGCAATAGAGTAAGACTCTGTCTCAAA |
|---|
| Alignment of AA371876_47_2697 to gnl|alu|HSU14574 |
2 cagcctggccaacatggtgaaaccccttctctactaaaaatatgaaaattatccgggcat 61
|||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||| |
86 cagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccgggcgt 145
62 ggtggtgtgcctctgtactttcagctactcaggaagctgaggcacaagaattgctggaac 121
||||| | || ||||| | ||||||||| ||| ||||||||| ||||| ||| ||||
146 ggtggcgcgcgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaac 205
122 atgggaggtggaggctgcagtgagctgagatcatgccactgcactccagcccaggcaata 181
|||||| ||||| |||||||||| |||||| ||||||||||||||||| ||| | |
206 ccgggaggcggaggttgcagtgagccgagatcgcgccactgcactccagcctgggcgaca 265
182 gagtaagactctgtctcaaa 201
||| |||||| ||||||||
266 gagcgagactccgtctcaaa 285
| Site name: | AA371876_47_2716 |
|---|
| Site flanking region: | GAAACCCCTTCTCTACTAAAAATATGAAAATTATCCGGGCATGGTGGTGTGCCTCTGTACTTTCAGCTAC
TCAGGAAGCTGAGGCACAAGAATTGCTGGAaCATGGGAGGTGGAGGCTGCAGTGAGCTGAGATCATGCCA
CTGCACTCCAGCCCAGGCAATAGAGTAAGACTCTGTCTCAAAACAAAAAGAGTTTTAGGCC |
|---|
| Alignment of AA371876_47_2716 to gnl|alu|HSU14574 |
1 gaaaccccttctctactaaaaatatgaaaattatccgggcatggtggtgtgcctctgtac 60
|||||||| ||||||||||||||| ||||||| |||||| |||||| | || |||||
104 gaaaccccgtctctactaaaaatacaaaaattagccgggcgtggtggcgcgcgcctgtaa 163
61 tttcagctactcaggaagctgaggcacaagaattgctggaacatgggaggtggaggctgc 120
| ||||||||| ||| ||||||||| ||||| ||| |||| |||||| ||||| |||
164 tcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgc 223
121 agtgagctgagatcatgccactgcactccagcccaggcaatagagtaagactctgtctca 180
||||||| |||||| ||||||||||||||||| ||| | |||| |||||| ||||||
224 agtgagccgagatcgcgccactgcactccagcctgggcgacagagcgagactccgtctca 283
181 aaa 183
|||
284 aaa 286
| Site name: | AA371876_47_2740 |
|---|
| Site flanking region: | TGAAAATTATCCGGGCATGGTGGTGTGCCTCTGTACTTTCAGCTACTCAGGAAGCTGAGGCACAAGAATT
GCTGGAACATGGGAGGTGGAGGCTGCAGTGaGCTGAGATCATGCCACTGCACTCCAGCCCAGGCAATAGA
GTAAGACTCTGTCTCAAAACAAAAAGAGTTTTAGGCCAGGTGTGGTGGCTCACGCCTGTAA |
|---|
| Alignment of AA371876_47_2740 to gnl|alu|M81836_HSAL001597 |
40 cagctactcaggaagctgaggcacaagaattgctggaacatgggaggtggaggctgcagt 99
||||||||| ||| ||||||||| ||||| || |||| ||||| | ||||| ||||||
181 cagctactc-ggaggctgaggcaggagaatgccttgaacctgggaagcggaggttgcagt 240
100 gagctgagatcatgccactgcactccagcccaggcaatagagtaagactctgtctcaaaa 159
|||| ||||||| ||||||||||||||||| ||||| || |||||||||||||||||||
241 gagcagagatcacgccactgcactccagcctgggcaacag-gtaagactctgtctcaaaa 300
160 caaaaa 165
|||||
301 aaaaaa 306
| Site name: | AA371876_47_2750 |
|---|
| Site flanking region: | CCGGGCATGGTGGTGTGCCTCTGTACTTTCAGCTACTCAGGAAGCTGAGGCACAAGAATTGCTGGAACAT
GGGAGGTGGAGGCTGCAGTGAGCTGAGATCaTGCCACTGCACTCCAGCCCAGGCAATAGAGTAAGACTCT
GTCTCAAAACAAAAAGAGTTTTAGGCCAGGTGTGGTGGCTCACGCCTGTAATCCCAGCACT |
|---|
| Alignment of AA371876_47_2750 to gnl|alu|M81836_HSAL001597 |
30 cagctactcaggaagctgaggcacaagaattgctggaacatgggaggtggaggctgcagt 89
||||||||| ||| ||||||||| ||||| || |||| ||||| | ||||| ||||||
181 cagctactc-ggaggctgaggcaggagaatgccttgaacctgggaagcggaggttgcagt 240
90 gagctgagatcatgccactgcactccagcccaggcaatagagtaagactctgtctcaaaa 149
|||| ||||||| ||||||||||||||||| ||||| || |||||||||||||||||||
241 gagcagagatcacgccactgcactccagcctgggcaacag-gtaagactctgtctcaaaa 300
150 caaaaa 155
|||||
301 aaaaaa 306
| Site name: | AA371876_47_2770 |
|---|
| Site flanking region: | CTGTACTTTCAGCTACTCAGGAAGCTGAGGCACAAGAATTGCTGGAACATGGGAGGTGGAGGCTGCAGTG
AGCTGAGATCATGCCACTGCACTCCAGCCCaGGCAATAGAGTAAGACTCTGTCTCAAAACAAAAAGAGTT
TTAGGCCAGGTGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCA |
|---|
| Alignment of AA371876_47_2770 to gnl|alu|M81836_HSAL001597 |
10 cagctactcaggaagctgaggcacaagaattgctggaacatgggaggtggaggctgcagt 69
||||||||| ||| ||||||||| ||||| || |||| ||||| | ||||| ||||||
181 cagctactc-ggaggctgaggcaggagaatgccttgaacctgggaagcggaggttgcagt 240
70 gagctgagatcatgccactgcactccagcccaggcaatagagtaagactctgtctcaaaa 129
|||| ||||||| ||||||||||||||||| ||||| || |||||||||||||||||||
241 gagcagagatcacgccactgcactccagcctgggcaacag-gtaagactctgtctcaaaa 300
130 caaaaa 135
|||||
301 aaaaaa 306
| Site name: | AA371876_47_2774 |
|---|
| Site flanking region: | ACTTTCAGCTACTCAGGAAGCTGAGGCACAAGAATTGCTGGAACATGGGAGGTGGAGGCTGCAGTGAGCT
GAGATCATGCCACTGCACTCCAGCCCAGGCaATAGAGTAAGACTCTGTCTCAAAACAAAAAGAGTTTTAG
GCCAGGTGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCAGATC |
|---|
| Alignment of AA371876_47_2774 to gnl|alu|M81836_HSAL001597 |
6 cagctactcaggaagctgaggcacaagaattgctggaacatgggaggtggaggctgcagt 65
||||||||| ||| ||||||||| ||||| || |||| ||||| | ||||| ||||||
181 cagctactc-ggaggctgaggcaggagaatgccttgaacctgggaagcggaggttgcagt 240
66 gagctgagatcatgccactgcactccagcccaggcaatagagtaagactctgtctcaaaa 125
|||| ||||||| ||||||||||||||||| ||||| || |||||||||||||||||||
241 gagcagagatcacgccactgcactccagcctgggcaacag-gtaagactctgtctcaaaa 300
126 caaaaa 131
|||||
301 aaaaaa 306
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | AB014607 |
|---|
| Multiple alignment | ATCCGGGCATGGTGGTGTGCCTCTGTACTTTCAGCTACTCAGGAAGCTGAGGCACAAGAA Chrom.1 NT_032977
GTCCGGGCATGGTGGTGTGCCTCTGTACTTTCAGCTACTCGGGAAGCTGGGGCACAAGAA AB014607
TTGCTGGAACATGGGAGGTGGAGGCTGCAGTGAGCTGAGATCATGCCACTGCACTCCAGC Chrom.1 NT_032977
TTGCTGGAGCATGGGAGGTGGGGGCTGCAGTGGGCTGAGATCGTGCCACTGCACTCCAGC AB014607
CCAGGCAATAGAGTAAGACTCTGTCTCAAAACAAAAAGAGTTTTAGG Chrom.1 NT_032977
CCGGGCGATAGAGTAAGACTCTGTCTCAAAACAAAAAGAGTTTTAGG AB014607
|
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| Sites: | AA371876_47_2978 AA371876_47_2979 Cytogenetic band: 1p32.2 |
|---|
| Site name: | AA371876_47_2978 |
|---|
| Site flanking region: | TGAGGTCAGGAGTTCGAGACCAGTCTGGCCAACATGGCGAAACCCCATCTCTCTCTACTAAAAATACAAA
ATTTAGCCAGGTGTGGTGGTGGGTGCCTGTaATCACAGCTGCTTGGGAGGCTGAGGCAGGAGAATTGGTT
GAACCCAGGAGGCAGAGGTTACAGTGAGCAGAGATCGTGCCACTGCATTCCAGCCGGGGTA |
|---|
| Alignment of AA371876_47_2978 to gnl|alu|HSU14573 |
1 tgaggtcaggagttcgagaccagtctggccaacatggcgaaaccccatctctctctacta 60
||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||
66 tgaggtcaggagttcgagaccagcctggccaacatggtgaaacccc----gtctctacta 125
61 aaaatacaaaatttagccaggtgtggtggtgggtgcctgtaatcacagctgcttgggagg 120
||||||||||| |||||| || ||||||| ||| |||||||||| ||||| || ||||||
126 aaaatacaaaaattagccgggcgtggtggcgggcgcctgtaatcccagctactcgggagg 185
121 ctgaggcaggagaattggttgaacccaggaggcagaggttacagtgagcagagatcgtgc 180
||||||||||||||| | |||||||| |||||| |||||| |||||||| ||||||| ||
186 ctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccgagatcgcgc 245
181 cactgcattccagcc 195
||||||| |||||||
246 cactgcactccagcc 260
| Site name: | AA371876_47_2979 |
|---|
| Site flanking region: | GAGGTCAGGAGTTCGAGACCAGTCTGGCCAACATGGCGAAACCCCATCTCTCTCTACTAAAAATACAAAA
TTTAGCCAGGTGTGGTGGTGGGTGCCTGTAaTCACAGCTGCTTGGGAGGCTGAGGCAGGAGAATTGGTTG
AACCCAGGAGGCAGAGGTTACAGTGAGCAGAGATCGTGCCACTGCATTCCAGCCGGGGTAA |
|---|
| Alignment of AA371876_47_2979 to gnl|alu|HSU14573 |
1 gaggtcaggagttcgagaccagtctggccaacatggcgaaaccccatctctctctactaa 60
|||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||
67 gaggtcaggagttcgagaccagcctggccaacatggtgaaacccc----gtctctactaa 126
61 aaatacaaaatttagccaggtgtggtggtgggtgcctgtaatcacagctgcttgggaggc 120
|||||||||| |||||| || ||||||| ||| |||||||||| ||||| || |||||||
127 aaatacaaaaattagccgggcgtggtggcgggcgcctgtaatcccagctactcgggaggc 186
121 tgaggcaggagaattggttgaacccaggaggcagaggttacagtgagcagagatcgtgcc 180
|||||||||||||| | |||||||| |||||| |||||| |||||||| ||||||| |||
187 tgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccgagatcgcgcc 246
181 actgcattccagcc 194
|||||| |||||||
247 actgcactccagcc 260
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | AB014607,BM264599 |
|---|
| Multiple alignment | AAAATACAAAATTTAGCCAGGTGTGGTGGTGGGTGCCTGTAATCACAGCTGCTTGGGAGG Chrom.1 NT_032977
AAAATACAAAATTTAGCCAGGTGTGGTGGTGGGTGCCTGTGGTCACAGCTGCTTGGGAGG AB014607
AAAATACAAAATTTAGCCAGGTGTGGTGGTGGGTGCCTGTGATCACAGCTGCTTGGGAGG BM264599
CTGAGGCAGGAGAATTGGTTGA Chrom.1 NT_032977
CTGAGGCAGGAGAATTGGTTGA AB014607
CTGAGGCAGGAGAATTGGTTGA BM264599
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| Sites: | AA371876_47_3047 AA371876_47_3078 Cytogenetic band: 1p32.2 |
|---|
| Site name: | AA371876_47_3047 |
|---|
| Site flanking region: | AATTTAGCCAGGTGTGGTGGTGGGTGCCTGTAATCACAGCTGCTTGGGAGGCTGAGGCAGGAGAATTGGT
TGAACCCAGGAGGCAGAGGTTACAGTGAGCaGAGATCGTGCCACTGCATTCCAGCCGGGGTAAGAGAGCG
AGACTCTGCCTCAAAAAAAGAAGGCTTAGTGTGCAACTCATCAGAGTTGCACAGGGCAGAG |
|---|
| Alignment of AA371876_47_3047 to gnl|alu|HSU14573 |
4 ttagccaggtgtggtggtgggtgcctgtaatcacagctgcttgggaggctgaggcaggag 63
|||||| || ||||||| ||| |||||||||| ||||| || ||||||||||||||||||
134 ttagccgggcgtggtggcgggcgcctgtaatcccagctactcgggaggctgaggcaggag 193
64 aattggttgaacccaggaggcagaggttacagtgagcagagatcgtgccactgcattcca 123
||| | |||||||| |||||| |||||| |||||||| ||||||| ||||||||| ||||
194 aatcgcttgaacccgggaggcggaggttgcagtgagccgagatcgcgccactgcactcca 253
124 gcc 126
|||
254 gcc 256
| Site name: | AA371876_47_3078 |
|---|
| Site flanking region: | AATCACAGCTGCTTGGGAGGCTGAGGCAGGAGAATTGGTTGAACCCAGGAGGCAGAGGTTACAGTGAGCA
GAGATCGTGCCACTGCATTCCAGCCGGGGTaAGAGAGCGAGACTCTGCCTCAAAAAAAGAAGGCTTAGTG
TGCAACTCATCAGAGTTGCACAGGGCAGAGAAAGAATGGGAAAAAAACAATTTCTAGAAAA |
|---|
| Alignment of AA371876_47_3078 to gnl|alu|HSU14574 |
1 aatcacagctgcttgggaggctgaggcaggagaattggttgaacccaggaggcagaggtt 60
|||| ||||| || ||||||||||||||||||||| | |||||||| |||||| ||||||
162 aatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggtt 221
61 acagtgagcagagatcgtgccactgcattccagccggggtaagagagcgagactc 115
|||||||| ||||||| ||||||||| ||||||| ||| | ||||||||||||
222 gcagtgagccgagatcgcgccactgcactccagcctgggcgacagagcgagactc 276
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | AB014607 |
|---|
| Multiple alignment | GAGAATTGGTTGAACCCAGGAGGCAGAGGTTACAGTGAGCAGAGATCGTGCCACTGCATT Chrom.1 NT_032977
GAGAATTGGTTGAACCCAGGAGGCAGAGGTTACAGTGAGCGGAGATCGTGCCACTGCATT AB014607
CCAGCCGGGGTAAGAGAGCGAGACTCTGCCTC.AAAAAAAGAAGGCTTAGTG Chrom.1 NT_032977
CCAGCCGGGGTGAGAGAGCGAGACTCTGCCTC.AAAAAAAGAAGGCTTAGTG AB014607
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| Sites: | AA371876_47_3358 AA371876_47_3371 Cytogenetic band: 1p32.2 |
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| Site name: | AA371876_47_3358 |
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| Site flanking region: | ATATGATTGTAGAGCACCAAAGTAAAAGATCTTATTTTTTATTAAAATTAAAAAAAAATTAAAATAGAGG
GTCTCACTATGCTGCCCAGGCTGGTCTTGAaCTCCTGGCTTCAAGCTATCCTCCCACCATGGCATCCTAA
AGTGCTGGGATTGCAGGCATGAGCTGCTGCATCTGGCCCAAAGTAAAAGATCTTAGAAGCG |
|---|
| Alignment of AA371876_47_3358 to gnl|alu|HSU14567 |
69 gggtctcactatgctgcccaggctggtcttgaactcctggcttcaagctatcctcccacc 128
|||| |||||||| ||||||||||||||| |||||||||| ||||| |||||||| ||
110 gggtttcactatgttgcccaggctggtctcgaactcctgggctcaagtgatcctcccgcc 51
129 atggcatcctaaagtgctgggattgcaggcatgagc 164
||| ||| |||||||||||||| ||||| |||||
50 tcggcctcccaaagtgctgggattacaggcgtgagc 15
| Site name: | AA371876_47_3371 |
|---|
| Site flanking region: | GCACCAAAGTAAAAGATCTTATTTTTTATTAAAATTAAAAAAAAATTAAAATAGAGGGTCTCACTATGCT
GCCCAGGCTGGTCTTGAACTCCTGGCTTCAaGCTATCCTCCCACCATGGCATCCTAAAGTGCTGGGATTG
CAGGCATGAGCTGCTGCATCTGGCCCAAAGTAAAAGATCTTAGAAGCGGCCAGAAAAAATA |
|---|
| Alignment of AA371876_47_3371 to gnl|alu|HSU14567 |
56 gggtctcactatgctgcccaggctggtcttgaactcctggcttcaagctatcctcccacc 115
|||| |||||||| ||||||||||||||| |||||||||| ||||| |||||||| ||
110 gggtttcactatgttgcccaggctggtctcgaactcctgggctcaagtgatcctcccgcc 51
116 atggcatcctaaagtgctgggattgcaggcatgagc 151
||| ||| |||||||||||||| ||||| |||||
50 tcggcctcccaaagtgctgggattacaggcgtgagc 15
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | AB014607 |
|---|
| Multiple alignment | AAAATAGAGGGTCTCACTATGCTGCCCAGGCTGGTCTTGAACTCCTGGCTTCAAGCTATC Chrom.1 NT_032977
AAAATAGAGGGTCTCACTATGCTGCCCAGGCTGGTCTTGAGCTCCTGGCTTCAGGCTATC AB014607
CTCCCACCATGGCATCCTAAAGTGCTGGGATTGC Chrom.1 NT_032977
CTCCCACCATGGCATCCTAAAGTGCTGGGATTGC AB014607
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| Sites: | AA371876_47_3697 Cytogenetic band: 1p32.2 |
|---|
| Site name: | AA371876_47_3697 |
|---|
| Site flanking region: | AGGCTCCTACATACAGTGAAAATGTTTTGAGAATGAGAATTATAATTTTTTGGCAAACAAAACTAAAGGA
GTTTACAACTAAGAAACTCTTTTGTGAGACaGCCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGACGAAA
TCTCAGCTCACTGCAACCTCGGCCTCCCGGGTTCAGGCAATTCTTGTGTCTCAGCCTTCCA |
|---|
| Alignment of AA371876_47_3697 to gnl|alu|M64231_HSAL003023 |
96 gagacagccttgctctgttgcccaggctggagtgcagtgacgaaatctcagctcactgca 155
||||||| ||||||||| ||||||||||||||||||||| | ||||||||||||||||
221 gagacagtcttgctctgctgcccaggctggagtgcagtggcacgatctcagctcactgca 162
156 acctc 160
||||
161 ccctc 157
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | AB014607 |
|---|
| Multiple alignment | AACTAAAGGAGTTTACAACTAAGAAACTCTTTTGTGAGACAGCCTTGCTCTGTTGCCCAG Chrom.1 NT_032977
AACTAAAGGAGTTTACAACTAAGAAACTCTTTTGTGAGACGGCCTTGCTCTGTTGCCCAG AB014607
GCTGGAGTGCAGTGACGAAAT Chrom.1 NT_032977
GCTGGAGTGCAGTGACGAAAT AB014607
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| Sites: | AA371876_47_4020 AA371876_47_4024 Cytogenetic band: 1p32.2 |
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| Site name: | AA371876_47_4020 |
|---|
| Site flanking region: | CCTTGGCCTGCTAAAGTGCTGGGATTACAGGCATGAGCGACTGTGCCTCTCCAGTCCCTGTGTTTTTTTT
TGTTTTTGGAGGTTTTATTTGTTTGTTTTTaGAGACACTTTCACTGTGTTGCCCAGGCCTGTCTGTTGGC
CTCAAGTGATCCTCCTGCCTTGGATCTCCCAAAGTGCTGGGATTACAGGTGTGAACCACTG |
|---|
| No alignment |
| Site name: | AA371876_47_4024 |
|---|
| Site flanking region: | GGCCTGCTAAAGTGCTGGGATTACAGGCATGAGCGACTGTGCCTCTCCAGTCCCTGTGTTTTTTTTTGTT
TTTGGAGGTTTTATTTGTTTGTTTTTAGAGaCACTTTCACTGTGTTGCCCAGGCCTGTCTGTTGGCCTCA
AGTGATCCTCCTGCCTTGGATCTCCCAAAGTGCTGGGATTACAGGTGTGAACCACTGTGCT |
|---|
| No alignment |
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | AB014607 |
|---|
| Multiple alignment | TGTTTTTTTTTGTTTTTGGAGGTTTTATTTGTTTGTTTTTAGAGACACTTTCACTGTGTT Chrom.1 NT_032977
TGTTTTTTTTTGTTTTTGGAGGTTTTATTTGTTTGTTTTTGGAGGCACTTTCACTGTGTT AB014607
GCCCAGGCCTGTCTGTTGGCCTCAA Chrom.1 NT_032977
GCCCAGGCCTGTCTGTTGGCCTCAA AB014607
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| Sites: | AA371876_47_4091 AA371876_47_4092 Cytogenetic band: 1p32.2 |
|---|
| Site name: | AA371876_47_4091 |
|---|
| Site flanking region: | GTTTTTGGAGGTTTTATTTGTTTGTTTTTAGAGACACTTTCACTGTGTTGCCCAGGCCTGTCTGTTGGCC
TCAAGTGATCCTCCTGCCTTGGATCTCCCAaAGTGCTGGGATTACAGGTGTGAACCACTGTGCTCAGCCC
ATTTTTTATTTGTTTCTTGAAGGAAGGTAGCAGTATTAATTAATTTTGGACTTTGCTCACT |
|---|
| Alignment of AA371876_47_4091 to gnl|alu|J03626_HSAL003202 |
70 ctcaagtgatcctcctgccttggatctcccaaagtgctgggattacaggtgtgaaccact 129
|||||| ||||||||||||| | |||| ||||||||||||||||||||||||| |||||
69 ctcaagcgatcctcctgcctcag-tctctcaaagtgctgggattacaggtgtgagccact 10
130 gtgctcagcc 139
|||| |||||
9 gtgcccagcc 0
| Site name: | AA371876_47_4092 |
|---|
| Site flanking region: | TTTTTGGAGGTTTTATTTGTTTGTTTTTAGAGACACTTTCACTGTGTTGCCCAGGCCTGTCTGTTGGCCT
CAAGTGATCCTCCTGCCTTGGATCTCCCAAaGTGCTGGGATTACAGGTGTGAACCACTGTGCTCAGCCCA
TTTTTTATTTGTTTCTTGAAGGAAGGTAGCAGTATTAATTAATTTTGGACTTTGCTCACTA |
|---|
| Alignment of AA371876_47_4092 to gnl|alu|J03626_HSAL003202 |
69 ctcaagtgatcctcctgccttggatctcccaaagtgctgggattacaggtgtgaaccact 128
|||||| ||||||||||||| | |||| ||||||||||||||||||||||||| |||||
69 ctcaagcgatcctcctgcctcag-tctctcaaagtgctgggattacaggtgtgagccact 10
129 gtgctcagcc 138
|||| |||||
9 gtgcccagcc 0
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | AB014607,AA730672 |
|---|
| Multiple alignment | TCTGTTGGCCTCAAGTGATCCTCCTGCCTTGGATCTCCCAAAGTGCTGGGATTACAGGTG Chrom.1 NT_032977
TCTGTTGGCCTCAAGTGATCCTCCTGCCTTGGATCTCCCAGGGTGCTGGGATTACAGGTG AB014607
-----TGGCCTCAAGTGATCCTCCTGCCTTGCATCTCCCAGGGTGCTGGGATTACAGGTG AA730672
TGAACCACTGTGCTCAGCCCAT Chrom.1 NT_032977
TGAACCACTGTGCTCAGCCCAT AB014607
TGAACCACTGTGCTCAGCCCAT AA730672
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| Sites: | AA371876_47_4250 Cytogenetic band: 1p32.2 |
|---|
| Site name: | AA371876_47_4250 |
|---|
| Site flanking region: | AAGGAAGGTAGCAGTATTAATTAATTTTGGACTTTGCTCACTAAAGTTTGAATGTTAAGAATAGATGTAT
ACAGTCTGGATGCAGTGGTGCATGCTTGTAaTTTTAGCACTTTGGGAGGCTGAAGCGGGAGGATCGCTTG
GGCTCAAGAGTTTGAGACCAGCCTGGGCAACATGGTGAAACCTTGTCTCTACAAAAAAATT |
|---|
| Alignment of AA371876_47_4250 to gnl|alu|M32673_HSAL001925 |
91 catgcttgtaattttagcactttgggaggctgaagcgggaggatcgcttgggctcaagag 150
||||| |||||| | |||||||||||||||||| | ||||||||| | || | || |||
20 catgcctgtaatctcagcactttgggaggctgaggtgggaggatcacgtgagtccaggag 79
151 tttgagaccagcct 164
||||| ||||||||
80 tttgaaaccagcct 93
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | AA730672 |
|---|
| Multiple alignment | ATAGATGTATACAGTCTGGATGCAGTGGTGCATGCTTGTAATTTTAGCACTTTGGGAGGC Chrom.1 NT_032977
ATAGATGTATACAGTCTGGATGCAGTGGTGCATGCTTGTAGTTTTAGCACTTTGGGGGGC AA730672
TGAAGCGGGAGGA.TCGCTTG Chrom.1 NT_032977
TGAAGCGGGAGGACTCGCTTG AA730672
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| Sites: | AA371876_47_4297 Cytogenetic band: 1p32.2 |
|---|
| Site name: | AA371876_47_4297 |
|---|
| Site flanking region: | TTTGAATGTTAAGAATAGATGTATACAGTCTGGATGCAGTGGTGCATGCTTGTAATTTTAGCACTTTGGG
AGGCTGAAGCGGGAGGATCGCTTGGGCTCAaGAGTTTGAGACCAGCCTGGGCAACATGGTGAAACCTTGT
CTCTACAAAAAAATTTTAAAAAATTAGCCAGACATGATGGCATGCACCTATAATCCCAGCT |
|---|
| Alignment of AA371876_47_4297 to gnl|alu|HSU14567 |
60 agcactttgggaggctgaagcgggaggatcgcttgggctcaagagtttgagaccagcctg 119
||||||||||||||| || ||||||||||| |||| || || ||||| ||||||||||||
33 agcactttgggaggccgaggcgggaggatcacttgagcccaggagttcgagaccagcctg 92
120 ggcaacatggtgaaaccttgtctctac 146
|||||||| |||||||| ||||||||
93 ggcaacatagtgaaaccccgtctctac 119
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | AA730672 |
|---|
| Multiple alignment | CACTTTGGGAGGCTGAAGCGGGAGGA.TCGCTTGGGCTCAAGAGTTTGAGACCAGCCTGG Chrom.1 NT_032977
CACTTTGGGGGGCTGAAGCGGGAGGACTCGCTTGGGCTCAGGAGTTTGAGACCAGCCTGG AA730672
GCAACATGGTGAAACCTTGTC Chrom.1 NT_032977
GCAACATGGTGAAACCTTGTC AA730672
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