| Alignment of AA334245_39_12 to gnl|alu|HSU14567 |
88 gagacaaggcctcactctatcgcctaggctgaagcacagtggtgcgatcacagctcgcta 147
|||||| || ||| |||| ||||| |||||| || |||||| |||||||| |||| ||
282 gagacagggtctcgctctgtcgcccaggctggagtgcagtggcgcgatcacggctcactg 223
148 cagccttgacctcctaggatcaagccatcctcctgcctcagc 189
|||||| ||||||| || |||||| ||||||||||||||||
222 cagcctcgacctcccgggctcaagcgatcctcctgcctcagc 181
| Site name: | AA334245_39_17 |
|---|
| Site flanking region: | AGGTAGTGGGCCTAAGGGGTTTGGTTGTCTTTTTTTTTTTTCATTTTTAAAATTTTAAATTTTTATTTAT
TATTATTTTTTAGAGACAAGGCCTCACTCTaTCGCCTAGGCTGAAGCACAGTGGTGCGATCACAGCTCGC
TACAGCCTTGACCTCCTAGGATCAAGCCATCCTCCTGCCTCAGCATCCACAGTAGCTGATG |
|---|
| Alignment of AA334245_39_17 to gnl|alu|HSU14567 |
83 gagacaaggcctcactctatcgcctaggctgaagcacagtggtgcgatcacagctcgcta 142
|||||| || ||| |||| ||||| |||||| || |||||| |||||||| |||| ||
282 gagacagggtctcgctctgtcgcccaggctggagtgcagtggcgcgatcacggctcactg 223
143 cagccttgacctcctaggatcaagccatcctcctgcctcagcatccacagtagctg 198
|||||| ||||||| || |||||| |||||||||||||||| ||| ||||||||
222 cagcctcgacctcccgggctcaagcgatcctcctgcctcagcctcccgagtagctg 167
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | AA334245,BC006280,AW961172,BE327738,NM032933,AA223419,BU633918,BF224212 |
|---|
| Multiple alignment | AGACAAGGCCTCACTCTATCGCCTAGGCTGAAGCACAGTGGTGCGA.TCACAGCTCGC Chrom.18 NT_010966
AGACAAGGCCTCGCTCTGTGGCCTAGGCTGAAGCACAGTGGTGCGATTCACAGCT+++ AA334245
AGACAAGGCCTCGCTCTATCGCCTAGGCTGAAGCACAGTGGTGCGA.TCACAGCTCGC BC006280
AGACAAGGCCTCGCTCTGTCGCCTAGGCTGAAGCACAGTGGTGCGA.TCACAGCTCGC AW961172
AGACAAGGCCTCGCTCTGTCGCCTAGGCTGAAGCACAGTGGTGTGA.TCACAGCTCGC BE327738
AGACAAGGCCTCGCTCTATCGCCTAGGCTGAAGCACAGTGGTGCGA.TCACAGCTCGC NM032933
AGACAAGGCCTCGCTCTGTCGCCTAGGCTGAAGCACAGTGGT.NGN.TCACGGCTCGC AA223419
AGACAAGGCCTCGCTCTGTCGCCTAGGCTGAAGCACAGTGGTGTGA.TCACAGCTCGC BU633918
AGACAAGGCCTCGCTCTGTCGCCTAGGCTGAAGCACAGTGGTGTGA.TCACAGCTCGC BF224212
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| Sites: | AA334245_39_59 Cytogenetic band: 18q11.1 |
|---|
| Site name: | AA334245_39_59 |
|---|
| Site flanking region: | CATTTTTAAAATTTTAAATTTTTATTTATTATTATTTTTTAGAGACAAGGCCTCACTCTATCGCCTAGGC
TGAAGCACAGTGGTGCGATCACAGCTCGCTaCAGCCTTGACCTCCTAGGATCAAGCCATCCTCCTGCCTC
AGCATCCACAGTAGCTGATGTGCACCACCAGACCCGTCTCATTTTTTCTATTTTTATTATT |
|---|
| Alignment of AA334245_39_59 to gnl|alu|HSU14567 |
42 gagacaaggcctcactctatcgcctaggctgaagcacagtggtgcgatcacagctcgcta 101
|||||| || ||| |||| ||||| |||||| || |||||| |||||||| |||| ||
282 gagacagggtctcgctctgtcgcccaggctggagtgcagtggcgcgatcacggctcactg 223
102 cagccttgacctcctaggatcaagccatcctcctgcctcagcatccacagtagctg 157
|||||| ||||||| || |||||| |||||||||||||||| ||| ||||||||
222 cagcctcgacctcccgggctcaagcgatcctcctgcctcagcctcccgagtagctg 167
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | BC006280,AW961172,BE327738,NM032933,AA223419,BU633918,BF224212 |
|---|
| Multiple alignment | CGCCTAGGCTGAAGCACAGTGGTGCGA.TCACAGCTCGCTACAGCCTTGACCTCCTAGGA Chrom.18 NT_010966
CGCCTAGGCTGAAGCACAGTGGTGCGA.TCACAGCTCGCTGCAGCCTTGACCTCCTAGGA BC006280
CGCCTAGGCTGAAGCACAGTGGTGCGA.TCACAGCTCGCTGCAGCCTTGACCTCCTAGGA AW961172
CGCCTAGGCTGAAGCACAGTGGTGTGA.TCACAGCTCGCTGCAGCCTTGGCCTCCTAGGA BE327738
CGCCTAGGCTGAAGCACAGTGGTGCGA.TCACAGCTCGCTGCAGCCTTGACCTCCTAGGA NM032933
CGCCTAGGCTGAAGCACAGTGGT.NGN.TCACGGCTCGCTGCAGCCTTGACCTCCTGGGA AA223419
CGCCTAGGCTGAAGCACAGTGGTGTGA.TCACAGCTCGCTGCAGCCTTGACCTCCTAGGA BU633918
CGCCTAGGCTGAAGCACAGTGGTGTGA.TCACAGCTCGCTGCAGCCTTGGCCTCCTAGGA BF224212
TCAAGCCATCCTCCTGCCTCA Chrom.18 NT_010966
TCAAGCCATCCTCCTGCCTCA BC006280
TCAAGCCATCCTCCTGCCTCA AW961172
TCAAGCCATCCTCCTGCCTCA BE327738
TCAAGCCATCCTCCTGCCTCA NM032933
TCAAGCCATCCTCCTGCCTCA AA223419
TCAAGCCATCCTCCTGCCTCA BU633918
TCAAGCCATCCTCCTGCCTCA BF224212
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| Sites: | AA334245_39_189 Cytogenetic band: 18q11.1 |
|---|
| Site name: | AA334245_39_189 |
|---|
| Site flanking region: | CTCCTGCCTCAGCATCCACAGTAGCTGATGTGCACCACCAGACCCGTCTCATTTTTTCTATTTTTATTAT
TTTAGAGATGGGGATCTCACTGTGTTGGCCaGGCTGGTCTCAAACTCCTGGGCTCAAGCAATCCTCCCAC
CTTGGCCTCAAAGTATTGAGATTACAGGCATGAGCCACTGCACCCGGCCTTTCTCATTTTT |
|---|
| Alignment of AA334245_39_189 to gnl|alu|M90058_HSAL002955 |
74 agagatggggatctcactgtgttggccaggctggtctcaaactcctgggctcaagcaatc 133
|||||||||| ||||||| ||| | ||||||||||||||||| |||||||||||||||||
117 agagatgggggtctcactatgt-gcccaggctggtctcaaacacctgggctcaagcaatc 58
134 ctcccaccttggcctcaaagtat--tgagattacaggcatgagccactgcac 183
|||| |||||||||| ||| | |||||||||||| |||||| |||||||
57 ctcctgccttggcctcccagtgtgctgagattacaggaatgagcaactgcac 6
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | BE327738,BF224212 |
|---|
| Multiple alignment | TTTTTATTATTTTAGAGATGGGGATCTCACTGTGTTGGCCA.GGCTGGTCTCAAACTCCT Chrom.18 NT_010966
TTTTTATTATTTTAGAGATGGGGATCTCACTGTGTTGCCCG.GGCTGGTCTCAAACTCCT BE327738
TTTTTATTATTTTAGAGATGGGGATCTCACTGTGTTGCCCG.GGCTGGTCTCAAACTCCT BF224212
GGGCTCAAGCAATCCTCCCAC Chrom.18 NT_010966
GGGCTCAAGCAATCCTCCCAC BE327738
GGGCTCAAGCAATCCTCCCAC BF224212
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| Sites: | AA334245_39_241 Cytogenetic band: 18q11.1 |
|---|
| Site name: | AA334245_39_241 |
|---|
| Site flanking region: | TTTTTTCTATTTTTATTATTTTAGAGATGGGGATCTCACTGTGTTGGCCAGGCTGGTCTCAAACTCCTGG
GCTCAAGCAATCCTCCCACCTTGGCCTCAAaGTATTGAGATTACAGGCATGAGCCACTGCACCCGGCCTT
TCTCATTTTTATTTTTAAATTGACAGACGTAACAGTGCGCATTTATCACGCACAACACAAT |
|---|
| Alignment of AA334245_39_241 to gnl|alu|M90058_HSAL002955 |
23 agagatggggatctcactgtgttggccaggctggtctcaaactcctgggctcaagcaatc 82
|||||||||| ||||||| ||| | ||||||||||||||||| |||||||||||||||||
117 agagatgggggtctcactatgt-gcccaggctggtctcaaacacctgggctcaagcaatc 58
83 ctcccaccttggcctcaaagtat--tgagattacaggcatgagccactgcac 132
|||| |||||||||| ||| | |||||||||||| |||||| |||||||
57 ctcctgccttggcctcccagtgtgctgagattacaggaatgagcaactgcac 6
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | BE327738,BF224212 |
|---|
| Multiple alignment | AAACTCCTGGGCTCAAGCAATCCTCCCACCTTGGCCTCAAAGTATTGAGATTACAGGCAT Chrom.18 NT_010966
AAACTCCTGGGCTCAAGCAATCCTCCCACCTTGGCCTCAAGGTATTGAGATTACAGGCAT BE327738
AAACTCCTGGGCTCAAGCAATCCTCCCACCTTGGCCTCAAGGTATTGAGATTACAGGCAT BF224212
GAGCCA Chrom.18 NT_010966
GAGCCA BE327738
GAGCCA BF224212
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| Sites: | AA334245_40_665 AA334245_40_688 Cytogenetic band: 18q11.1 |
|---|
| Site name: | AA334245_40_665 |
|---|
| Site flanking region: | CCCTTTCATTCCCTGATATCTCAGAGATTTCAAATCATTGAACACTGAAGTATATTTTTCAGGCCAGATG
AAAAATTGTATTAAAACCCTATTCCTGGTCaGGCGCAGTGGCTCACGCCTATAATCCCAGCACTTTGGGA
GGCCGAAGTAAGCAGATCACCTGAGGTCGGGAGTTCAAGACAAACCTGGCCAACATGGTGA |
|---|
| Alignment of AA334245_40_665 to gnl|alu|L16854_HSAL004034 |
100 caggcgcagtggctcacgcctataatcccagcactttgggaggccgaagtaagcagatca 159
|||| ||||||| |||| ||| ||||||||||||||| ||||| || | | || |||||
4 caggtgcagtggttcacacctgtaatcccagcactttcagaggctgaggca-gcggatca 63
160 cctgaggtcgggagttcaagacaaacctggccaacatggtga 201
||||||||| ||||||| |||| | |||||||||||||||||
64 cctgaggtcaggagttcgagaccagcctggccaacatggtga 105
| Site name: | AA334245_40_688 |
|---|
| Site flanking region: | TCAGAGATTTCAAATCATTGAACACTGAAGTATATTTTTCAGGCCAGATGAAAAATTGTATTAAAACCCT
ATTCCTGGTCAGGCGCAGTGGCTCACGCCTaTAATCCCAGCACTTTGGGAGGCCGAAGTAAGCAGATCAC
CTGAGGTCGGGAGTTCAAGACAAACCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAC |
|---|
| Alignment of AA334245_40_688 to gnl|alu|HSU14574 |
82 ggcgcagtggctcacgcctataatcccagcactttgggaggccgaagtaagcagatcacc 141
||||| ||||||||||||| ||||||||||||||||||||||||| | || |||||||
6 ggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacc 65
142 tgaggtcgggagttcaagacaaacctggccaacatggtgaaaccctgtctctactaaaa 200
||||||| ||||||| |||| | |||||||||||||||||||||| |||||||||||||
66 tgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaa 124
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | BU622225,BM450399 |
|---|
| Multiple alignment | GCCAGATGAAAAATT.GTATTAAAACCCTATTCCT.GGTCAGGCGCAGT.GGCTCACGCC Chrom.18 NT_010966
GCCAGATGAAAAATT.GTATTAAAACCCTATTCCT.GGTCGGGCGCAGT.GGCTCACGCC BU622225
GCCAGATGAAAAATT.GTATTAAAACCCTATTCCT.GGTCGGGCGCAGT.GGCTCACGCC BM450399
.T.ATAATCCC.AGCACTTTGGGAGG.CCGAAGTAAGCAGATCA Chrom.18 NT_010966
.T.ATAATCCC.AGCACTTTGGGAGG.CCGAAGTAAGTANATCG BU622225
.T.GTAATCCC.AGCACTTTGGGAGG.CCGAAGTAAGCAGATCA BM450399
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| Sites: | AA334245_40_733 AA334245_40_753 Cytogenetic band: 18q11.1 |
|---|
| Site name: | AA334245_40_733 |
|---|
| Site flanking region: | CCAGATGAAAAATTGTATTAAAACCCTATTCCTGGTCAGGCGCAGTGGCTCACGCCTATAATCCCAGCAC
TTTGGGAGGCCGAAGTAAGCAGATCACCTGaGGTCGGGAGTTCAAGACAAACCTGGCCAACATGGTGAAA
CCCTGTCTCTACTAAAACTACAAAAAAATTAGCCTGATGTGGTGTTGTGTGCCTGTAGTCC |
|---|
| Alignment of AA334245_40_733 to gnl|alu|HSU14574 |
39 ggcgcagtggctcacgcctataatcccagcactttgggaggccgaagtaagcagatcacc 98
||||| ||||||||||||| ||||||||||||||||||||||||| | || |||||||
6 ggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacc 65
99 tgaggtcgggagttcaagacaaacctggccaacatggtgaaaccctgtctctactaaaa 157
||||||| ||||||| |||| | |||||||||||||||||||||| |||||||||||||
66 tgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaa 124
| Site name: | AA334245_40_753 |
|---|
| Site flanking region: | AAACCCTATTCCTGGTCAGGCGCAGTGGCTCACGCCTATAATCCCAGCACTTTGGGAGGCCGAAGTAAGC
AGATCACCTGAGGTCGGGAGTTCAAGACAAaCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAACTA
CAAAAAAATTAGCCTGATGTGGTGTTGTGTGCCTGTAGTCCCAGCTACTTAGGAGGCTGAG |
|---|
| Alignment of AA334245_40_753 to gnl|alu|HSU14574 |
19 ggcgcagtggctcacgcctataatcccagcactttgggaggccgaagtaagcagatcacc 78
||||| ||||||||||||| ||||||||||||||||||||||||| | || |||||||
6 ggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacc 65
79 tgaggtcgggagttcaagacaaacctggccaacatggtgaaaccctgtctctactaaaa 137
||||||| ||||||| |||| | |||||||||||||||||||||| |||||||||||||
66 tgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaa 124
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | AL521158,BM450399 |
|---|
| Multiple alignment | CCC.AGCACTTTGGGAGG.CCGAAGTAAGCAGATCACCTGAGGTCGGGAGTTCAAGACAA Chrom.18 NT_010966
CCC.AGCACTTTGGGGGG.CCGAAGTAAGCAGATCACCTGGGGTCGGGRGTTCAAGACAA AL521158
CCC.AGCACTTTGGGAGG.CCGAAGTAAGCAGATCACCTGAGGTCGGGAGTTCAAGACCA BM450399
ACCTGG.CCAACATGGTGAAA.CCCTGTCTCTACTAAAACT Chrom.18 NT_010966
ACCTGG.CCAACATGGTGAAA..CCTGTCTCTACTAAMACT AL521158
GCCTGG.CCAACATGGTGAAA.CCCTGTCTCTACTAAAACT BM450399
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| Sites: | AA334245_40_845 AA334245_40_858 Cytogenetic band: 18q11.1 |
|---|
| Site name: | AA334245_40_845 |
|---|
| Site flanking region: | TTCAAGACAAACCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAACTACAAAAAAATTAGCCTGATGT
GGTGTTGTGTGCCTGTAGTCCCAGCTACTTaGGAGGCTGAGGTAGGAGAATTGCTTGAACCTGGGAGGCG
GAGGTTGCAGTGAGCCAAAATTACGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACAG |
|---|
| Alignment of AA334245_40_845 to gnl|alu|HSU14574 |
12 cctggccaacatggtgaaaccctgtctctactaaaactacnnnnnnnttagcctgatgtg 71
|||||||||||||||||||||| ||||||||||||| ||| |||||| | |||
89 cctggccaacatggtgaaaccccgtctctactaaaaatacaaaaa--ttagccgggcgtg 148
72 gtgttgtgtgcctgtagtcccagctacttaggaggctgaggtaggagaattgcttgaacc 131
||| | | ||||||| ||||||||||| ||||||||||| |||||||| |||||||||
149 gtggcgcgcgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacc 208
132 tgggaggcggaggttgcagtgagccaaaattacgccactgcactccagcctgggcaacag 191
|||||||||||||||||||||||| | || ||||||||||||||||||||||| ||||
209 cgggaggcggaggttgcagtgagccgagatcgcgccactgcactccagcctgggcgacag 268
192 agcgagac 199
||||||||
269 agcgagac 276
| Site name: | AA334245_40_858 |
|---|
| Site flanking region: | TGGCCAACATGGTGAAACCCTGTCTCTACTAAAACTACAAAAAAATTAGCCTGATGTGGTGTTGTGTGCC
TGTAGTCCCAGCTACTTAGGAGGCTGAGGTaGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAGTGA
GCCAAAATTACGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACAGTCTCAAAAACAAC |
|---|
| Alignment of AA334245_40_858 to gnl|alu|Z15030_HSAL001064 |
69 cctgtagtcccagctacttaggaggctgaggtaggagaattgcttgaacctgggaggcgg 128
|||||| |||||||||||| ||||||||||| || ||||||||||||||||||||||| |
157 cctgtaatcccagctacttgggaggctgaggcagaagaattgcttgaacctgggaggcag 216
129 aggttgcagtgagccaaaattacgccactgcactccagcctgggcaacagagcgaga--c 186
|| |||||||||||||| |||| |||||||||||||||||||||| ||||||| ||| |
217 agattgcagtgagccaagattatgccactgcactccagcctgggcgacagagcaagactc 276
187 agtctcaaaaa 197
|||||||||||
277 agtctcaaaaa 287
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | AW974191,AI521649,AL521157,BX375374,AL521158,BM450399 |
|---|
| Multiple alignment | AGCCTGATGTGGTGTTGTGTGCCTGTAGTCCCAGCTACTTAGGAGGCTGAGGTAGGAGAA Chrom.18 NT_010966
AGCCTGATGTGGTGTTGTGTGCCTGTAGTCCCAGCTACTTAGGAGGCTGAGGTGGGAGAA AW974191
------------------------------------------GAGGCTGAGGTGGGAGAA AI521649
AGCCTGATGTGGTGTTGTGTGCCTGTAGTCCCAGCTACTTAGGAGGCTGAGGTGGGAGAA AL521157
AGCCTGATGTGGTGTTGTGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTAGGAGAA BX375374
AGCCTGATGTGGTGTTGTGTGCCTGTAGTCCCAGCTACTTAGGWGGCTGAGGTGGGAGAA AL521158
AGCCTGATGTGGTGTTGTGTGCCTGTAGTCCCAGCTACTTAGGAGGCTGAGGTGGGAGAA BM450399
TTGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAG Chrom.18 NT_010966
TTGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAG AW974191
TTGCTTGAGCCTGGGAGGCGGAGGTTGCAGTGAG AI521649
TTGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAG AL521157
TTGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAG BX375374
TTGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAG AL521158
TTGCTTGAGCCTGGGAGGCGGAGGTTGCGGTGAG BM450399
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