| Alignment of AA303611_7_226 to gnl|alu|X16864_HSAL000461 |
99 ccaggagttggaggctgcagtgagctatgatcgtgccactgcactccagcctgggtgaca 158
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
144 ccaggagtttgaggctgcagtgagctatgatcgtgccactgcactccagcctgggt-aca 203
159 gagtgagaccctgtctc 175
||||||||||| |||||
204 gagtgagaccccgtctc 220
| Site name: | AA303611_7_250 |
|---|
| Site flanking region: | CATTAGCCAGGTGTGTTGGCATGTGTCTGTAGTCTCAGCTACATGTTAGGTTGAAGCAGAAGGATTGTTT
GAGGCCAGGAGTTGGAGGCTGCAGTGAGCTaTGATCGTGCCACTGCACTCCAGCCTGGGTGACAGAGTGA
GACCCTGTCTCAAAACAAAATTAATAATAAAACAATTTTAAAAGACTGCCCAGCCATCACC |
|---|
| Alignment of AA303611_7_250 to gnl|alu|X16864_HSAL000461 |
75 ccaggagttggaggctgcagtgagctatgatcgtgccactgcactccagcctgggtgaca 134
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
144 ccaggagtttgaggctgcagtgagctatgatcgtgccactgcactccagcctgggt-aca 203
135 gagtgagaccctgtctc 151
||||||||||| |||||
204 gagtgagaccccgtctc 220
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | BC038668,BC050531,BI547904,BI548328 |
|---|
| Multiple alignment | AGCTACATGTTAGGTTGAAGCAGAAGGATTGTTTGAGGCCAGGAGTTGGAGGCTGCAGTG Chrom.7 NT_007933
AGCTACATGTTAGGTTGAAGCAGAAGGATTGTTTGAGGCCGGGAGTTGGAGGCTGCAGTG BC038668
AGCTACATGTTAGGTTGAAGCAGAAGGATTGTTTGAGGCCAGGAGTTGGAGGCTGCAGTG BC050531
AGCTACATGTTAGGTTGAAGCAGAAGGATTGTTTGAGGCCGGGAGTTGGAGGCTGCAGTG BI547904
AGCTACATGTTAGGTTGAAGCAGAAGGATTGTTTGAGGCCGGGAGTTGGAGGCTGCAGTG BI548328
AGCTATGATCGTGCCACTGCACTCCAGCCTGGGTGACAGAGTGAG Chrom.7 NT_007933
AGCTGTGATCGTGCCACTGCACTCCAGCCTGGGTGACAGAGTGAG BC038668
AGCTGTGATCGTGCCACTGCACTCCAGCCTGGGTGACAGAGTGAG BC050531
AGCTGTGATCGTGCCACTGCACTCCAGCCTGGGTGACAGAGTGAG BI547904
AGCTGTGATCGTGCCACTG.ACTCCA.CCTGGGTGAC.GAGTG.G BI548328
|
|
|
|
|
|
|
|
|
|
| Sites: | AA303611_7_567 AA303611_7_570 AA303611_7_598 Cytogenetic band: 7q22.1 |
|---|
| Site name: | AA303611_7_567 |
|---|
| Site flanking region: | GAGTGTGGTGGCACGATCTCAGCTCACTGCAATCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCCTTAG
CCTCCCCAGTAGCTGAGATCACAGGTGCACaCCATCATGCCCAGCTAATTCTTTTATTTTTAGTGTAGCA
AGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCTGCCCGCC |
|---|
| Alignment of AA303611_7_567 to gnl|alu|HSU14574 |
8 gtggcacgatctcagctcactgcaatctccgcctcccaggttcaagcgattctcctgcct 67
||||| ||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||
244 gtggcgcgatctcggctcactgcaacctccgcctcccgggttcaagcgattctcctgcct 185
68 tagcctccccagtagctgagatcacaggtgcacaccatcatgcccagctaattcttttat 127
|||||||| |||||||| ||| ||||| || | ||| || |||| ||||||| || |||
184 cagcctcccgagtagctgggattacaggcgcgcgccaccacgcccggctaatttttgtat 125
128 ttttagtgtagcaagggtttcaccatgttggccaggctggtctcgaactcctgacctcaa 187
||||||| || |||||||||||||||||||||||||||||||||||||||||||||
124 ttttagtagagacggggtttcaccatgttggccaggctggtctcgaactcctgacctcag 65
188 gtgatctgcccgcc 201
|||||| |||||||
64 gtgatccgcccgcc 51
| Site name: | AA303611_7_570 |
|---|
| Site flanking region: | TGTGGTGGCACGATCTCAGCTCACTGCAATCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCCTTAGCCT
CCCCAGTAGCTGAGATCACAGGTGCACACCaTCATGCCCAGCTAATTCTTTTATTTTTAGTGTAGCAAGG
GTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCTGCCCGCCTTG |
|---|
| Alignment of AA303611_7_570 to gnl|alu|HSU14574 |
5 gtggcacgatctcagctcactgcaatctccgcctcccaggttcaagcgattctcctgcct 64
||||| ||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||
244 gtggcgcgatctcggctcactgcaacctccgcctcccgggttcaagcgattctcctgcct 185
65 tagcctccccagtagctgagatcacaggtgcacaccatcatgcccagctaattcttttat 124
|||||||| |||||||| ||| ||||| || | ||| || |||| ||||||| || |||
184 cagcctcccgagtagctgggattacaggcgcgcgccaccacgcccggctaatttttgtat 125
125 ttttagtgtagcaagggtttcaccatgttggccaggctggtctcgaactcctgacctcaa 184
||||||| || |||||||||||||||||||||||||||||||||||||||||||||
124 ttttagtagagacggggtttcaccatgttggccaggctggtctcgaactcctgacctcag 65
185 gtgatctgcccgcct 199
|||||| ||||||||
64 gtgatccgcccgcct 50
| Site name: | AA303611_7_598 |
|---|
| Site flanking region: | ATCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCCTTAGCCTCCCCAGTAGCTGAGATCACAGGTGCACA
CCATCATGCCCAGCTAATTCTTTTATTTTTaGTGTAGCAAGGGTTTCACCATGTTGGCCAGGCTGGTCTC
GAACTCCTGACCTCAAGTGATCTGCCCGCCTTGGCCTCCCAGACTGCTGAGATTACAGGCG |
|---|
| Alignment of AA303611_7_598 to gnl|alu|HSU14574 |
3 ctccgcctcccaggttcaagcgattctcctgccttagcctccccagtagctgagatcaca 62
||||||||||| |||||||||||||||||||||| |||||||| |||||||| ||| |||
218 ctccgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggattaca 159
63 ggtgcacaccatcatgcccagctaattcttttatttttagtgtagcaagggtttcaccat 122
|| || | ||| || |||| ||||||| || |||||||||| || ||||||||||||
158 ggcgcgcgccaccacgcccggctaatttttgtatttttagtagagacggggtttcaccat 99
123 gttggccaggctggtctcgaactcctgacctcaagtgatctgcccgccttggcctcccag 182
||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||
98 gttggccaggctggtctcgaactcctgacctcaggtgatccgcccgcctcggcctcccaa 39
183 actgctgagattacaggcg 201
| ||||| |||||||||||
38 agtgctgggattacaggcg 20
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | BC038668,BC050531 |
|---|
| Multiple alignment | CCTGCCTTAGCCTCCCCAGTAGCTGAGATCACAGGTGCACACCATCATGCCCAGCTAATT Chrom.7 NT_007933
CCTGCCTTGGCCTCCACAGTGGCTGAGATCACGGGTGCACGCCATCATGCCCGGCTAATT BC038668
CCTGCCTTAGCCTCCCCAGTAGCTGAGATCACAGGTGCACGCCGTCATGCCCAGCTAATT BC050531
CTTTTATTTTTAGTGTAGCAAGGGTTTCACCATGTTGGCCAGGCTGGTCTCG Chrom.7 NT_007933
CTTTTGTTTTTGGTGTAGCAGGGGTTTCACCATGTTGGCCAGGCTGGTCTCG BC038668
CTTTTATTTTTGGTGTAGCAAGGGTTTCACCATGTTGGCCAGGCTGGTCTCG BC050531
|
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|
|
|
|
|
|
|
|
| Sites: | AA303611_7_653 Cytogenetic band: 7q22.1 |
|---|
| Site name: | AA303611_7_653 |
|---|
| Site flanking region: | GATCACAGGTGCACACCATCATGCCCAGCTAATTCTTTTATTTTTAGTGTAGCAAGGGTTTCACCATGTT
GGCCAGGCTGGTCTCGAACTCCTGACCTCAaGTGATCTGCCCGCCTTGGCCTCCCAGACTGCTGAGATTA
CAGGCGTGAGCCACTGCACCCAGCCTACTGCTCTTCTTTTTCCTTTTAGGATCCTAGAATT |
|---|
| Alignment of AA303611_7_653 to gnl|alu|HSU14574 |
23 gcccagctaattcttttatttttagtgtagcaagggtttcaccatgttggccaggctggt 82
|||| ||||||| || |||||||||| || |||||||||||||||||||||||||||
143 gcccggctaatttttgtatttttagtagagacggggtttcaccatgttggccaggctggt 84
83 ctcgaactcctgacctcaagtgatctgcccgccttggcctcccagactgctgagattaca 142
|||||||||||||||||| |||||| |||||||| ||||||||| | ||||| |||||||
83 ctcgaactcctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggattaca 24
143 ggcgtgagccac 154
||||||||||||
23 ggcgtgagccac 12
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | BC038668,BC050531 |
|---|
| Multiple alignment | TCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCTGCCCGCCTTGGC Chrom.7 NT_007933
TCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCTGCCCGCCTTGGC BC038668
TCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCTGCCCGCCTTGGC BC050531
CTCCCAGACTGCTGAGATTAC Chrom.7 NT_007933
CTCCCAGACTGCTGAGATTAC BC038668
CTCCCAGACTGCTGAGATTAC BC050531
|
|
|
|
|
|
|
|
|
|
| Sites: | AA303611_13_894 AA303611_13_895 AA303611_13_896 Cytogenetic band: 7q22.1 |
|---|
| Site name: | AA303611_13_894 |
|---|
| Site flanking region: | AAGACAGAAATTCCCACCTTCGTGGAACTCTCCATTTTCCTAAATGTTAGGTTGGTGCAAAACTAATCGT
GGTTTTTGCCATTTTTAATTTTTAATGGCAaAAGCCACTATTACTTTTGCACCAACCTAATAGGCCGATT
CAGAAACTTGAGTGCAATGTCTTGGATATGCAAAAAAGAAAATCAAAACGCATTCTTCATT |
|---|
| No alignment |
| Site name: | AA303611_13_895 |
|---|
| Site flanking region: | AGACAGAAATTCCCACCTTCGTGGAACTCTCCATTTTCCTAAATGTTAGGTTGGTGCAAAACTAATCGTG
GTTTTTGCCATTTTTAATTTTTAATGGCAAaAGCCACTATTACTTTTGCACCAACCTAATAGGCCGATTC
AGAAACTTGAGTGCAATGTCTTGGATATGCAAAAAAGAAAATCAAAACGCATTCTTCATTC |
|---|
| No alignment |
| Site name: | AA303611_13_896 |
|---|
| Site flanking region: | GACAGAAATTCCCACCTTCGTGGAACTCTCCATTTTCCTAAATGTTAGGTTGGTGCAAAACTAATCGTGG
TTTTTGCCATTTTTAATTTTTAATGGCAAAaGCCACTATTACTTTTGCACCAACCTAATAGGCCGATTCA
GAAACTTGAGTGCAATGTCTTGGATATGCAAAAAAGAAAATCAAAACGCATTCTTCATTCT |
|---|
| No alignment |
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | HSM802453,NM022777,AK024179 |
|---|
| Multiple alignment | ACTAATCGTGGTTTTTGCCATTTTTAATTTTTAA.TGGCAAAAGCCAC.TATTACTTTTG Chrom.7 NT_007933
ACTAATCGTGGTTTTTGCCATTTTTAATTTTTAA.TGGCAAGGGCCAC.TATTACTTTTG HSM802453
ACTAATCGTGGTTTTTGCCATTTTTAATTTTTAA.TGGCAGGGGCCAC.TATTACTTTTG NM022777
ACTAATCGTGGTTTTTGCCATTTTTAATTTTTAA.TGGCAGGGGCCAC.TATTACTTTTG AK024179
CA.CCAACCTAATAGGCCGATTC Chrom.7 NT_007933
CA.CCAACCTAATAGGCCGATTC HSM802453
CA.CCAACCTAATAGGCCGATTC NM022777
CA.CCAACCTAATAGGCCGATTC AK024179
|
|
|
|
|
|
|
|
|
|
| Sites: | AA303611_13_1062 AA303611_13_1063 Cytogenetic band: 7q22.1 |
|---|
| Site name: | AA303611_13_1062 |
|---|
| Site flanking region: | ATATGCAAAAAAGAAAATCAAAACGCATTCTTCATTCTCTATAAGAGTTCTAGGCGGGGCGTGGTGGCTC
ACACTTGTAATCCCAGCACTTTGGGAGGCCaAGGTGGGCGGATCATGAGGTCAGGAGATCGAGACCATCC
TGACCAACGTGGTGAAACCCCATCTCTACTAAAAATAGAAAAATCAGCTGGGTGTGGTGCC |
|---|
| Alignment of AA303611_13_1062 to gnl|alu|HSU14571 |
57 gggcgtggtggctcacacttgtaatcccagcactttgggaggccaaggtgggcggatcat 116
||||| |||||||||| | ||||||||||||||||||||||||| ||| ||||||||||
5 gggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcac 64
117 gaggtcaggagatcgagaccatcctgaccaacgtggtgaaaccccatctctactaaaaat 176
||||||| |||||||||||||||||| ||||| |||||||||||| ||||||||||||||
65 gaggtcaagagatcgagaccatcctggccaacatggtgaaaccccgtctctactaaaaat 124
177 agaaaaatcagctgggtgtggtg 199
| |||||| ||||||| ||||||
125 acaaaaattagctgggcgtggtg 147
| Site name: | AA303611_13_1063 |
|---|
| Site flanking region: | TATGCAAAAAAGAAAATCAAAACGCATTCTTCATTCTCTATAAGAGTTCTAGGCGGGGCGTGGTGGCTCA
CACTTGTAATCCCAGCACTTTGGGAGGCCAaGGTGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCT
GACCAACGTGGTGAAACCCCATCTCTACTAAAAATAGAAAAATCAGCTGGGTGTGGTGCCG |
|---|
| Alignment of AA303611_13_1063 to gnl|alu|HSU14571 |
56 gggcgtggtggctcacacttgtaatcccagcactttgggaggccaaggtgggcggatcat 115
||||| |||||||||| | ||||||||||||||||||||||||| ||| ||||||||||
5 gggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcac 64
116 gaggtcaggagatcgagaccatcctgaccaacgtggtgaaaccccatctctactaaaaat 175
||||||| |||||||||||||||||| ||||| |||||||||||| ||||||||||||||
65 gaggtcaagagatcgagaccatcctggccaacatggtgaaaccccgtctctactaaaaat 124
176 agaaaaatcagctgggtgtggtg 198
| |||||| ||||||| ||||||
125 acaaaaattagctgggcgtggtg 147
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | HSM802453 |
|---|
| Multiple alignment | GTGGTGGCTCACACTTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGCGGATCATGAGG Chrom.7 NT_007933
GTGGTGGCTCACACTTGTAATCCCAGCACTTTGGGAGGCCGGGGTGGGCGGATCATGAGG HSM802453
TCAGGAGATCGAGACCATCCTG Chrom.7 NT_007933
TCAGGAGATCGAGACCATCCTG HSM802453
|
|
|
|
|
|
|
|
|
|
| Sites: | AA303611_14_54 AA303611_14_59 AA303611_14_78 AA303611_14_87 AA303611_14_119 AA303611_14_137 AA303611_14_159 AA303611_14_169 AA303611_14_183 Cytogenetic band: 7q22.1 |
|---|
| Site name: | AA303611_14_54 |
|---|
| Site flanking region: | CTCCAGCTTGGGCAACAGAGCAAGACTCCATCTCAAAAAAAAAAGAGTTCTAGCCCAGGAGCGGTGGCTC
ACACTTGTAATCCCAGCACTTTGGGATGCTaAGGCAGGCGGATCACTTGAGGCCAGGAGTTCAAGACCAG
CCTGGCCAACATGGCAAAATCCCATCTCTACTAAAAATACAAAAATTCACAGGGTGTGTTG |
|---|
| Alignment of AA303611_14_54 to gnl|alu|HSU14574 |
61 gcggtggctcacacttgtaatcccagcactttgggatgctaaggcaggcggatcacttga 120
|||||||||||| | ||||||||||||||||||||| || |||| |||||||||| |||
9 gcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacctga 68
121 ggccaggagttcaagaccagcctggccaacatggcaaaatcccatctctactaaaaatac 180
|| ||||||||| ||||||||||||||||||||| ||| ||| ||||||||||||||||
69 ggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatac 128
181 aaaaatt 187
|||||||
129 aaaaatt 135
| Site name: | AA303611_14_59 |
|---|
| Site flanking region: | GCTTGGGCAACAGAGCAAGACTCCATCTCAAAAAAAAAAGAGTTCTAGCCCAGGAGCGGTGGCTCACACT
TGTAATCCCAGCACTTTGGGATGCTAAGGCaGGCGGATCACTTGAGGCCAGGAGTTCAAGACCAGCCTGG
CCAACATGGCAAAATCCCATCTCTACTAAAAATACAAAAATTCACAGGGTGTGTTGGCACA |
|---|
| Alignment of AA303611_14_59 to gnl|alu|HSU14574 |
56 gcggtggctcacacttgtaatcccagcactttgggatgctaaggcaggcggatcacttga 115
|||||||||||| | ||||||||||||||||||||| || |||| |||||||||| |||
9 gcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacctga 68
116 ggccaggagttcaagaccagcctggccaacatggcaaaatcccatctctactaaaaatac 175
|| ||||||||| ||||||||||||||||||||| ||| ||| ||||||||||||||||
69 ggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatac 128
176 aaaaatt 182
|||||||
129 aaaaatt 135
| Site name: | AA303611_14_78 |
|---|
| Site flanking region: | ACTCCATCTCAAAAAAAAAAGAGTTCTAGCCCAGGAGCGGTGGCTCACACTTGTAATCCCAGCACTTTGG
GATGCTAAGGCAGGCGGATCACTTGAGGCCaGGAGTTCAAGACCAGCCTGGCCAACATGGCAAAATCCCA
TCTCTACTAAAAATACAAAAATTCACAGGGTGTGTTGGCACACGCCTGTAATACCAGCTAC |
|---|
| Alignment of AA303611_14_78 to gnl|alu|HSU14574 |
37 gcggtggctcacacttgtaatcccagcactttgggatgctaaggcaggcggatcacttga 96
|||||||||||| | ||||||||||||||||||||| || |||| |||||||||| |||
9 gcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacctga 68
97 ggccaggagttcaagaccagcctggccaacatggcaaaatcccatctctactaaaaatac 156
|| ||||||||| ||||||||||||||||||||| ||| ||| ||||||||||||||||
69 ggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatac 128
157 aaaaattcacagggtgtgttggcacacgcctgtaataccagctac 201
||||||| | ||| ||| |||| | |||||||||| ||||||||
129 aaaaattagccgggcgtggtggcgcgcgcctgtaatcccagctac 173
| Site name: | AA303611_14_87 |
|---|
| Site flanking region: | CAAAAAAAAAAGAGTTCTAGCCCAGGAGCGGTGGCTCACACTTGTAATCCCAGCACTTTGGGATGCTAAG
GCAGGCGGATCACTTGAGGCCAGGAGTTCAaGACCAGCCTGGCCAACATGGCAAAATCCCATCTCTACTA
AAAATACAAAAATTCACAGGGTGTGTTGGCACACGCCTGTAATACCAGCTACTCAGGTGGC |
|---|
| Alignment of AA303611_14_87 to gnl|alu|HSU14574 |
28 gcggtggctcacacttgtaatcccagcactttgggatgctaaggcaggcggatcacttga 87
|||||||||||| | ||||||||||||||||||||| || |||| |||||||||| |||
9 gcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacctga 68
88 ggccaggagttcaagaccagcctggccaacatggcaaaatcccatctctactaaaaatac 147
|| ||||||||| ||||||||||||||||||||| ||| ||| ||||||||||||||||
69 ggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatac 128
148 aaaaattcacagggtgtgttggcacacgcctgtaataccagctactc 194
||||||| | ||| ||| |||| | |||||||||| ||||||||||
129 aaaaattagccgggcgtggtggcgcgcgcctgtaatcccagctactc 175
| Site name: | AA303611_14_119 |
|---|
| Site flanking region: | GTGGCTCACACTTGTAATCCCAGCACTTTGGGATGCTAAGGCAGGCGGATCACTTGAGGCCAGGAGTTCA
AGACCAGCCTGGCCAACATGGCAAAATCCCaTCTCTACTAAAAATACAAAAATTCACAGGGTGTGTTGGC
ACACGCCTGTAATACCAGCTACTCAGGTGGCTGAGGCATAAGAATTGCTTGAGCCTGGGAG |
|---|
| Alignment of AA303611_14_119 to gnl|alu|HSU14574 |
1 gtggctcacacttgtaatcccagcactttgggatgctaaggcaggcggatcacttgaggc 60
||||||||| | ||||||||||||||||||||| || |||| |||||||||| |||||
12 gtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacctgaggt 71
61 caggagttcaagaccagcctggccaacatggcaaaatcccatctctactaaaaatacaaa 120
||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||||||||
72 caggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaa 131
121 aattcacagggtgtgttggcacacgcctgtaataccagctactcaggtggctgaggcata 180
|||| | ||| ||| |||| | |||||||||| |||||||||| || ||||||||||
132 aattagccgggcgtggtggcgcgcgcctgtaatcccagctactcgggaggctgaggcagg 191
181 agaattgcttgagcctgggag 201
||||| |||||| || |||||
192 agaatcgcttgaacccgggag 212
| Site name: | AA303611_14_137 |
|---|
| Site flanking region: | CCCAGCACTTTGGGATGCTAAGGCAGGCGGATCACTTGAGGCCAGGAGTTCAAGACCAGCCTGGCCAACA
TGGCAAAATCCCATCTCTACTAAAAATACAaAAATTCACAGGGTGTGTTGGCACACGCCTGTAATACCAG
CTACTCAGGTGGCTGAGGCATAAGAATTGCTTGAGCCTGGGAGGCAGAGATTGCACTGAGC |
|---|
| Alignment of AA303611_14_137 to gnl|alu|HSU14574 |
1 cccagcactttgggatgctaaggcaggcggatcacttgaggccaggagttcaagaccagc 60
||||||||||||||| || |||| |||||||||| ||||| ||||||||| ||||||||
30 cccagcactttgggaggccgaggcgggcggatcacctgaggtcaggagttcgagaccagc 89
61 ctggccaacatggcaaaatcccatctctactaaaaatacaaaaattcacagggtgtgttg 120
||||||||||||| ||| ||| ||||||||||||||||||||||| | ||| ||| ||
90 ctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccgggcgtggtg 149
121 gcacacgcctgtaataccagctactcaggtggctgaggcataagaattgcttgagcctgg 180
|| | |||||||||| |||||||||| || |||||||||| ||||| |||||| || ||
150 gcgcgcgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgg 209
181 gaggcagagattgcactgagc 201
||||| ||| ||||| |||||
210 gaggcggaggttgcagtgagc 230
| Site name: | AA303611_14_159 |
|---|
| Site flanking region: | GCAGGCGGATCACTTGAGGCCAGGAGTTCAAGACCAGCCTGGCCAACATGGCAAAATCCCATCTCTACTA
AAAATACAAAAATTCACAGGGTGTGTTGGCaCACGCCTGTAATACCAGCTACTCAGGTGGCTGAGGCATA
AGAATTGCTTGAGCCTGGGAGGCAGAGATTGCACTGAGCCGAGATCGCGCCACTATACTCC |
|---|
| Alignment of AA303611_14_159 to gnl|alu|HSU14574 |
4 ggcggatcacttgaggccaggagttcaagaccagcctggccaacatggcaaaatcccatc 63
|||||||||| ||||| ||||||||| ||||||||||||||||||||| ||| ||| ||
55 ggcggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtc 114
64 tctactaaaaatacaaaaattcacagggtgtgttggcacacgcctgtaataccagctact 123
||||||||||||||||||||| | ||| ||| |||| | |||||||||| |||||||||
115 tctactaaaaatacaaaaattagccgggcgtggtggcgcgcgcctgtaatcccagctact 174
124 caggtggctgaggcataagaattgcttgagcctgggaggcagagattgcactgagccgag 183
| || |||||||||| ||||| |||||| || ||||||| ||| ||||| |||||||||
175 cgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccgag 234
184 atcgcgccact 194
|||||||||||
235 atcgcgccact 245
| Site name: | AA303611_14_169 |
|---|
| Site flanking region: | CACTTGAGGCCAGGAGTTCAAGACCAGCCTGGCCAACATGGCAAAATCCCATCTCTACTAAAAATACAAA
AATTCACAGGGTGTGTTGGCACACGCCTGTaATACCAGCTACTCAGGTGGCTGAGGCATAAGAATTGCTT
GAGCCTGGGAGGCAGAGATTGCACTGAGCCGAGATCGCGCCACTATACTCCAGCCTGGGCA |
|---|
| Alignment of AA303611_14_169 to gnl|alu|HSU14574 |
5 tgaggccaggagttcaagaccagcctggccaacatggcaaaatcccatctctactaaaaa 64
||||| ||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||
66 tgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaa 125
65 tacaaaaattcacagggtgtgttggcacacgcctgtaataccagctactcaggtggctga 124
|||||||||| | ||| ||| |||| | |||||||||| |||||||||| || ||||||
126 tacaaaaattagccgggcgtggtggcgcgcgcctgtaatcccagctactcgggaggctga 185
125 ggcataagaattgcttgagcctgggaggcagagattgcactgagccgagatcgcgccact 184
|||| ||||| |||||| || ||||||| ||| ||||| ||||||||||||||||||||
186 ggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccgagatcgcgccact 245
185 atactccagcctgggc 200
||||||||||||||
246 gcactccagcctgggc 261
| Site name: | AA303611_14_183 |
|---|
| Site flanking region: | AGTTCAAGACCAGCCTGGCCAACATGGCAAAATCCCATCTCTACTAAAAATACAAAAATTCACAGGGTGT
GTTGGCACACGCCTGTAATACCAGCTACTCaGGTGGCTGAGGCATAAGAATTGCTTGAGCCTGGGAGGCA
GAGATTGCACTGAGCCGAGATCGCGCCACTATACTCCAGCCTGGGCAACAGACATCCTGTC |
|---|
| Alignment of AA303611_14_183 to gnl|alu|Z15030_HSAL001064 |
1 agttcaagaccagcctggccaacatggcaaaatcccatctctactaaaaatacaaaaatt 60
||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||
76 agttcaagaccagcctggccaacatggtgaagccccgtctctactaaaaatacaaaaatt 135
61 cacagggtgtgttggcacacgcctgtaataccagctactcaggtggctgaggcataagaa 120
| ||||||| ||||| | |||||||| ||||||||| || |||||||||| |||||
136 agctgggtgtggtggcatgcacctgtaatcccagctacttgggaggctgaggcagaagaa 195
121 ttgcttgagcctgggaggcagagattgcactgagccgagatcgcgccactatactccagc 180
|||||||| |||||||||||||||||||| |||||| |||| |||||| ||||||||
196 ttgcttgaacctgggaggcagagattgcagtgagccaagattatgccactgcactccagc 255
181 ctgggcaacaga 192
|||||| |||||
256 ctgggcgacaga 267
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | NM022777,AK024179,HSM802453 |
|---|
| Multiple alignment | GCGGTGGCTCACACTTGTAATCCCAGCACTTTGGGATGCTAAGGCAGGCGGATCACTTGA Chrom.7 NT_007933
GCGGTGGCTCACACTTGTAATCCCAGCACTTTGGGATGCTGAGGCGGGCGGATCACTTGA NM022777
GCGGTGGCTCACACTTGTAATCCCAGCACTTTGGGATGCTGAGGCGGGCGGATCACTTGA AK024179
GCGGTGGCTCACACTTGTAATCCCAGCACTTTGGGATGCTGAGGCAGGCGGATCACTTGA HSM802453
GGCCAGGAGTTCAAGACCAGCCTGG.CCAACATGGCAAAAT.CCCATCTCTACTAAAAAT Chrom.7 NT_007933
GGCCAGGAGTTCAAGACCAGCCTGG.CCAACATGGCAAAAT.CCCATCTCTACTAAAAAT NM022777
GGCCAGGAGTTCAAGACCAGCCTGG.CCAACATGGCAAAAT.CCCATCTCTACTAAAAAT AK024179
GGCCGGGAGTTCAGGACCAGCCTGG.CCAACATGGCAAAAT.CCCGTCTCTACTAAAAAT HSM802453
ACAAAAATTCACAGGGTGTGTTGGCACACGCCTGTAATACCAGCTACTCAGGTGGCTGAG Chrom.7 NT_007933
ACAGAAATTCACAGGGTGTGTTGGCACACGCCTGTAATACCAGCTACTCAGGTGGCTGAG NM022777
ACAGAAATTCACAGGGTGTGTTGGCACACGCCTGTAATACCAGCTACTCAGGTGGCTGAG AK024179
ACAAAAATTTACAGGGTGTGTTGGCGCACGCCTGTGATACCAGCTACTCGGGTGGCTGAG HSM802453
GCATAAGAATTGCTTGAGCCTGGGAGGCAG Chrom.7 NT_007933
GCATAAGAATTGCTTGAGCCTGGGAGGCAG NM022777
GCATAAGAATTGCTTGAGCCTGGGAGGCAG AK024179
GCATAAGAATTGCTTGAGCCTGGGAGGCAG HSM802453
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| Sites: | AA303611_14_561 AA303611_14_588 AA303611_14_600 Cytogenetic band: 7q22.1 |
|---|
| Site name: | AA303611_14_561 |
|---|
| Site flanking region: | TAACCCCCAAATCAATACTGTGGCACTTTCTCAGTTATTCGCAGACACACAGAGACAAAAAATTTGAAGT
GCCTGGCTGGGCGTGGTGGCTCACGCCTGTaATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACAA
GGTCCAGAGATCGAGACCATCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACA |
|---|
| Alignment of AA303611_14_561 to gnl|alu|HSU14571 |
79 gggcgtggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcac 138
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
5 gggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcac 64
139 aaggtccagagatcgagaccatcctggccaacatggtgaaaccccgtctctactaaaaat 198
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
65 gaggtcaagagatcgagaccatcctggccaacatggtgaaaccccgtctctactaaaaat 124
199 aca 201
|||
125 aca 127
| Site name: | AA303611_14_588 |
|---|
| Site flanking region: | TTCTCAGTTATTCGCAGACACACAGAGACAAAAAATTTGAAGTGCCTGGCTGGGCGTGGTGGCTCACGCC
TGTAATCCCAGCACTTTGGGAGGCCGAGGCaGGCGGATCACAAGGTCCAGAGATCGAGACCATCCTGGCC
AACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCTGGGCATGGTGGGGCATG |
|---|
| Alignment of AA303611_14_588 to gnl|alu|HSU14571 |
52 gggcgtggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcac 111
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
5 gggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcac 64
112 aaggtccagagatcgagaccatcctggccaacatggtgaaaccccgtctctactaaaaat 171
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
65 gaggtcaagagatcgagaccatcctggccaacatggtgaaaccccgtctctactaaaaat 124
172 acaaaaattagctgggcatggtgg 195
||||||||||||||||| ||||||
125 acaaaaattagctgggcgtggtgg 148
| Site name: | AA303611_14_600 |
|---|
| Site flanking region: | CGCAGACACACAGAGACAAAAAATTTGAAGTGCCTGGCTGGGCGTGGTGGCTCACGCCTGTAATCCCAGC
ACTTTGGGAGGCCGAGGCAGGCGGATCACAaGGTCCAGAGATCGAGACCATCCTGGCCAACATGGTGAAA
CCCCGTCTCTACTAAAAATACAAAAATTAGCTGGGCATGGTGGGGCATGCCTGTAGTCCCA |
|---|
| Alignment of AA303611_14_600 to gnl|alu|HSU14571 |
40 gggcgtggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcac 99
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
5 gggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcac 64
100 aaggtccagagatcgagaccatcctggccaacatggtgaaaccccgtctctactaaaaat 159
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
65 gaggtcaagagatcgagaccatcctggccaacatggtgaaaccccgtctctactaaaaat 124
160 acaaaaattagctgggcatggtggggcatgcctgtagtccca 201
||||||||||||||||| |||||| || |||||||||||||
125 acaaaaattagctgggcgtggtggcgcgcgcctgtagtccca 166
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | BQ053188,HSM802453 |
|---|
| Multiple alignment | AATTTGAAGTGCCTGGCTGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGG Chrom.7 NT_007933
AATTTGAAGTGCCTGGCTGGGCGTGGTGGCTCACGCCTGTGATCCCAGCACTTTGGGAGG BQ053188
AATTTGAAGTGCCTGGCTGGGCGTGGTGGCTCACGCCTGTGATCCCAGCACTTTGGGAGG HSM802453
CCGAGGCAGGCGGATCACAAGGTCCAGAGATCGAGACCATCCTGGCCAACATGGTGAAAC Chrom.7 NT_007933
CCGAGGCGGGCGGATCACAAGGTCCAGAGATCGAGACCATCCTGGCCAACATGGTGAAAC BQ053188
CCGAGGCAGGCGGATCACAGGGTCCAGAGATCGAGACCATCCTGGCCAACATGGTGAAAC HSM802453
Chrom.7 NT_007933
BQ053188
HSM802453
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| Sites: | AA303611_14_650 AA303611_14_653 Cytogenetic band: 7q22.1 |
|---|
| Site name: | AA303611_14_650 |
|---|
| Site flanking region: | CTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACAAGGTCCAGAGATCGAGACCA
TCCTGGCCAACATGGTGAAACCCCGTCTCTaCTAAAAATACAAAAATTAGCTGGGCATGGTGGGGCATGC
CTGTAGTCCCAGCTACTCAGAAGGGTGAGGCAGAATTGCCTGAACCCGCGAGGCGGAGACT |
|---|
| Alignment of AA303611_14_650 to gnl|alu|HSU14571 |
1 ctcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacaaggtccagag 60
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||
16 ctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaagag 75
61 atcgagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
76 atcgagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattag 135
121 ctgggcatggtggggcatgcctgtagtcccagctactcagaagggtgaggc---agaatt 177
|||||| |||||| || |||||||||||||||||||| | ||| |||||| |||||
136 ctgggcgtggtggcgcgcgcctgtagtcccagctactcgggaggctgaggcaggagaatc 195
178 gcctgaacccgcgaggcggag 198
|| |||||||| |||||||||
196 gcttgaacccgggaggcggag 216
| Site name: | AA303611_14_653 |
|---|
| Site flanking region: | ACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACAAGGTCCAGAGATCGAGACCATCC
TGGCCAACATGGTGAAACCCCGTCTCTACTaAAAATACAAAAATTAGCTGGGCATGGTGGGGCATGCCTG
TAGTCCCAGCTACTCAGAAGGGTGAGGCAGAATTGCCTGAACCCGCGAGGCGGAGACTGCA |
|---|
| Alignment of AA303611_14_653 to gnl|alu|HSU14571 |
1 acgcctgtaatcccagcactttgggaggccgaggcaggcggatcacaaggtccagagatc 60
||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||
19 acgcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaagagatc 78
61 gagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
79 gagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctg 138
121 ggcatggtggggcatgcctgtagtcccagctactcagaagggtgaggc---agaattgcc 177
||| |||||| || |||||||||||||||||||| | ||| |||||| ||||| ||
139 ggcgtggtggcgcgcgcctgtagtcccagctactcgggaggctgaggcaggagaatcgct 198
178 tgaacccgcgaggcggag 195
|||||||| |||||||||
199 tgaacccgggaggcggag 216
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | BQ053188,HSM802453 |
|---|
| Multiple alignment | ATCGAGACCATCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAG Chrom.7 NT_007933
ATCGAGACCATCCTGGCCAACATGGTGAAACCCCGTCTCTACTGAAAATACAAAAATTAG BQ053188
ATCGAGACCATCCTGGCCAACATGGTGAAACCCCGTCTCTGCTAAAAATACAAAAATTAG HSM802453
CTGGGCATGGTGGGGCATGCCTGT Chrom.7 NT_007933
CTGGGCATGGTGGGGCATGCCTGT BQ053188
CTGGGCATGGTGGGGCATGCCTGT HSM802453
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| Sites: | AA303611_14_1063 AA303611_14_1064 Cytogenetic band: 7q22.1 |
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| Site name: | AA303611_14_1063 |
|---|
| Site flanking region: | GCCAGGCATGTTGGCACACACCTGTAATACCAGCTACTCATGTGGCTGAGGCATAAGAATTGCTTGAGCC
TGGAGGCCGGGTGCAGTGGCTTACGCCTGTaATCCCAACACTTTGGGAGTCTGAGACGGGTGGAAATCCT
GAGGTCAGGAGTTCAAGACCAGCCTGTCCAACATGGTGAAACCCCGTCTCTACTAAAAATA |
|---|
| Alignment of AA303611_14_1063 to gnl|alu|HSU14573 |
75 ggccgggtgcagtggcttacgcctgtaatcccaacactttgggagtctgagacgggtgga 134
||||||| || |||||| ||||||||||||||| ||||||||||| | ||| ||||||||
1 ggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtgga 60
135 aatcctgaggtcaggagttcaagaccagcctgtccaacatggtgaaaccccgtctctact 194
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
61 tcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctact 120
195 aaaaata 201
|||||||
121 aaaaata 127
| Site name: | AA303611_14_1064 |
|---|
| Site flanking region: | CCAGGCATGTTGGCACACACCTGTAATACCAGCTACTCATGTGGCTGAGGCATAAGAATTGCTTGAGCCT
GGAGGCCGGGTGCAGTGGCTTACGCCTGTAaTCCCAACACTTTGGGAGTCTGAGACGGGTGGAAATCCTG
AGGTCAGGAGTTCAAGACCAGCCTGTCCAACATGGTGAAACCCCGTCTCTACTAAAAATAC |
|---|
| Alignment of AA303611_14_1064 to gnl|alu|HSU14573 |
74 ggccgggtgcagtggcttacgcctgtaatcccaacactttgggagtctgagacgggtgga 133
||||||| || |||||| ||||||||||||||| ||||||||||| | ||| ||||||||
1 ggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtgga 60
134 aatcctgaggtcaggagttcaagaccagcctgtccaacatggtgaaaccccgtctctact 193
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
61 tcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctact 120
194 aaaaatac 201
||||||||
121 aaaaatac 128
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | BQ053188 |
|---|
| Multiple alignment | TGCTTGAGCCTGGAGGCCGGGTGCAGTGGCTTACGCCTGTAATCCCAACACTTTGGGAGT Chrom.7 NT_007933
TGCTTGAGCCTGGAGGCCGGGTGCAGTGGCTTACGCCTGTGGTCCCAACACTTTGGGAGT BQ053188
CTGAGACGGGTGGAAATCCTGA Chrom.7 NT_007933
CTGAGACGGGTGGAAATCCTGA BQ053188
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