| Alignment of AA085642_16_28 to gnl|alu|HSU14574 |
62 agtcttgctctttcgcccaggatggagtgcagtggtgcgatctcggctcactgcaacctc 121
||||| ||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||
275 agtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaacctc 216
122 cgcctcccgggttcaagcagttctcctgcctcagcctcctgagtagctgggattacaggc 181
|||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
215 cgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggc 156
182 atgtgccaccacgcctggct 201
| ||||||||||| ||||
155 gcgcgccaccacgcccggct 136
| Site name: | AA085642_16_39 |
|---|
| Site flanking region: | ACTGAGTCCATTTAACTTGCTTTCTTTTTTTTTTTTTTTTTTTTGAGATAAAGTCTTGCTCTTTCGCCCA
GGATGGAGTGCAGTGGTGCGATCTCGGCTCaCTGCAACCTCCGCCTCCCGGGTTCAAGCAGTTCTCCTGC
CTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCACCACGCCTGGCTAATTTTTGTA |
|---|
| Alignment of AA085642_16_39 to gnl|alu|HSU14574 |
52 agtcttgctctttcgcccaggatggagtgcagtggtgcgatctcggctcactgcaacctc 111
||||| ||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||
275 agtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaacctc 216
112 cgcctcccgggttcaagcagttctcctgcctcagcctcctgagtagctgggattacaggc 171
|||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
215 cgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggc 156
172 atgtgccaccacgcctggctaatttttgta 201
| ||||||||||| ||||||||||||||
155 gcgcgccaccacgcccggctaatttttgta 126
| Site name: | AA085642_16_46 |
|---|
| Site flanking region: | TCCATTTAACTTGCTTTCTTTTTTTTTTTTTTTTTTTTGAGATAAAGTCTTGCTCTTTCGCCCAGGATGG
AGTGCAGTGGTGCGATCTCGGCTCACTGCAaCCTCCGCCTCCCGGGTTCAAGCAGTTCTCCTGCCTCAGC
CTCCTGAGTAGCTGGGATTACAGGCATGTGCCACCACGCCTGGCTAATTTTTGTATTTTTA |
|---|
| Alignment of AA085642_16_46 to gnl|alu|HSU14574 |
46 agtcttgctctttcgcccaggatggagtgcagtggtgcgatctcggctcactgcaacctc 105
||||| ||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||
275 agtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaacctc 216
106 cgcctcccgggttcaagcagttctcctgcctcagcctcctgagtagctgggattacaggc 165
|||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
215 cgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggc 156
166 atgtgccaccacgcctggctaatttttgtattttta 201
| ||||||||||| ||||||||||||||||||||
155 gcgcgccaccacgcccggctaatttttgtattttta 120
| Site name: | AA085642_16_68 |
|---|
| Site flanking region: | TTTTTTTTTTTTTTTTTTTGAGATAAAGTCTTGCTCTTTCGCCCAGGATGGAGTGCAGTGGTGCGATCTC
GGCTCACTGCAACCTCCGCCTCCCGGGTTCaAGCAGTTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATT
ACAGGCATGTGCCACCACGCCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGTTCCACCA |
|---|
| Alignment of AA085642_16_68 to gnl|alu|HSU14574 |
27 agtcttgctctttcgcccaggatggagtgcagtggtgcgatctcggctcactgcaacctc 86
||||| ||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||
275 agtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaacctc 216
87 cgcctcccgggttcaagcagttctcctgcctcagcctcctgagtagctgggattacaggc 146
|||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
215 cgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggc 156
147 atgtgccaccacgcctggctaatttttgtatttttagtagagacggg 193
| ||||||||||| |||||||||||||||||||||||||||||||
155 gcgcgccaccacgcccggctaatttttgtatttttagtagagacggg 109
| Site name: | AA085642_16_69 |
|---|
| Site flanking region: | TTTTTTTTTTTTTTTTTTGAGATAAAGTCTTGCTCTTTCGCCCAGGATGGAGTGCAGTGGTGCGATCTCG
GCTCACTGCAACCTCCGCCTCCCGGGTTCAaGCAGTTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTA
CAGGCATGTGCCACCACGCCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGTTCCACCAT |
|---|
| Alignment of AA085642_16_69 to gnl|alu|HSU14574 |
26 agtcttgctctttcgcccaggatggagtgcagtggtgcgatctcggctcactgcaacctc 85
||||| ||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||
275 agtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaacctc 216
86 cgcctcccgggttcaagcagttctcctgcctcagcctcctgagtagctgggattacaggc 145
|||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
215 cgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggc 156
146 atgtgccaccacgcctggctaatttttgtatttttagtagagacggg 192
| ||||||||||| |||||||||||||||||||||||||||||||
155 gcgcgccaccacgcccggctaatttttgtatttttagtagagacggg 109
| Site name: | AA085642_16_102 |
|---|
| Site flanking region: | TTGCTCTTTCGCCCAGGATGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAACCTCCGCCTCCCGGGTTC
AAGCAGTTCTCCTGCCTCAGCCTCCTGAGTaGCTGGGATTACAGGCATGTGCCACCACGCCTGGCTAATT
TTTGTATTTTTAGTAGAGACGGGTTCCACCATGTTGGCCAGGCTGGTCTCCAACTCCTGAC |
|---|
| Alignment of AA085642_16_102 to gnl|alu|HSU14574 |
3 gctctttcgcccaggatggagtgcagtggtgcgatctcggctcactgcaacctccgcctc 62
||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
269 gctctgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaacctccgcctc 210
63 ccgggttcaagcagttctcctgcctcagcctcctgagtagctgggattacaggcatgtgc 122
|||||||||||| ||||||||||||||||||| |||||||||||||||||||| | ||
209 ccgggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcgcgc 150
123 caccacgcctggctaatttttgtatttttagtagagac-gggttccaccatgttggccag 181
||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||
149 caccacgcccggctaatttttgtatttttagtagagacggggtttcaccatgttggccag 90
182 gctggtctccaactcctgac 201
||||||||| ||||||||||
89 gctggtctcgaactcctgac 70
| Site name: | AA085642_16_112 |
|---|
| Site flanking region: | GCCCAGGATGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCAGTTCT
CCTGCCTCAGCCTCCTGAGTAGCTGGGATTaCAGGCATGTGCCACCACGCCTGGCTAATTTTTGTATTTT
TAGTAGAGACGGGTTCCACCATGTTGGCCAGGCTGGTCTCCAACTCCTGACCTCAAATGAT |
|---|
| Alignment of AA085642_16_112 to gnl|alu|HSU14574 |
1 gcccaggatggagtgcagtggtgcgatctcggctcactgcaacctccgcctcccgggttc 60
||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
261 gcccaggctggagtgcagtggcgcgatctcggctcactgcaacctccgcctcccgggttc 202
61 aagcagttctcctgcctcagcctcctgagtagctgggattacaggcatgtgccaccacgc 120
|||| ||||||||||||||||||| |||||||||||||||||||| | ||||||||||
201 aagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcgcgccaccacgc 142
121 ctggctaatttttgtatttttagtagagac-gggttccaccatgttggccaggctggtct 179
| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
141 ccggctaatttttgtatttttagtagagacggggtttcaccatgttggccaggctggtct 82
180 ccaactcctgacctca 195
| ||||||||||||||
81 cgaactcctgacctca 66
| Site name: | AA085642_16_114 |
|---|
| Site flanking region: | CCAGGATGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCAGTTCTCC
TGCCTCAGCCTCCTGAGTAGCTGGGATTACaGGCATGTGCCACCACGCCTGGCTAATTTTTGTATTTTTA
GTAGAGACGGGTTCCACCATGTTGGCCAGGCTGGTCTCCAACTCCTGACCTCAAATGATCC |
|---|
| Alignment of AA085642_16_114 to gnl|alu|HSU14574 |
1 ccaggatggagtgcagtggtgcgatctcggctcactgcaacctccgcctcccgggttcaa 60
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
259 ccaggctggagtgcagtggcgcgatctcggctcactgcaacctccgcctcccgggttcaa 200
61 gcagttctcctgcctcagcctcctgagtagctgggattacaggcatgtgccaccacgcct 120
|| ||||||||||||||||||| |||||||||||||||||||| | |||||||||||
199 gcgattctcctgcctcagcctcccgagtagctgggattacaggcgcgcgccaccacgccc 140
121 ggctaatttttgtatttttagtagagac-gggttccaccatgttggccaggctggtctcc 179
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
139 ggctaatttttgtatttttagtagagacggggtttcaccatgttggccaggctggtctcg 80
180 aactcctgacctca 193
||||||||||||||
79 aactcctgacctca 66
| Site name: | AA085642_16_125 |
|---|
| Site flanking region: | TGCAGTGGTGCGATCTCGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCAGTTCTCCTGCCTCAGCCT
CCTGAGTAGCTGGGATTACAGGCATGTGCCaCCACGCCTGGCTAATTTTTGTATTTTTAGTAGAGACGGG
TTCCACCATGTTGGCCAGGCTGGTCTCCAACTCCTGACCTCAAATGATCCACCCACCTAGG |
|---|
| Alignment of AA085642_16_125 to gnl|alu|HSU14573 |
1 tgcagtggtgcgatctcggctcactgcaacctccgcctcccgggttcaagcagttctcct 60
|||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
248 tgcagtggcgcgatctcggctcactgcaacctccgcctcccgggttcaagcgattctcct 189
61 gcctcagcctcctgagtagctgggattacaggcatgtgccaccacgcctggctaattttt 120
|||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||
188 gcctcagcctcccgagtagctgggattacaggcgcccgccaccacgcccggctaattttt 129
121 gtatttttagtagagac-gggttccaccatgttggccaggctggtctccaactcctgacc 179
||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||
128 gtatttttagtagagacggggtttcaccatgttggccaggctggtctcgaactcctgacc 69
180 tcaaatgatccaccc 194
||| ||||||||||
68 tcaggtgatccaccc 54
| Site name: | AA085642_17_23 |
|---|
| Site flanking region: | ACCTCCGCCTCCCGGGTTCAAGCAGTTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTG
CCACCACGCCTGGCTAATTTTTGTATTTTTaGTAGAGACGGGTTCCACCATGTTGGCCAGGCTGGTCTCC
AACTCCTGACCTCAAATGATCCACCCACCTAGGCCTCCCAAAGTGCTGGGATTACAGGAGT |
|---|
| Alignment of AA085642_17_23 to gnl|alu|HSU14573 |
1 acctccgcctcccgggttcaagcagttctcctgcctcagcctcctgagtagctgggatta 60
||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
220 acctccgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggatta 161
61 caggcatgtgccaccacgcctggctaatttttgtatttttagtagagacggg-ttccacc 119
||||| ||||||||||| ||||||||||||||||||||||||||||||| || ||||
160 caggcgcccgccaccacgcccggctaatttttgtatttttagtagagacggggtttcacc 101
120 atgttggccaggctggtctccaactcctgacctcaaatgatccacccacctaggcctccc 179
|||||||||||||||||||| |||||||||||||| |||||||||| ||| ||||||||
100 atgttggccaggctggtctcgaactcctgacctcaggtgatccacccgcctcggcctccc 41
180 aaagtgctgggattacagg 198
|||||||||||||||||||
40 aaagtgctgggattacagg 22
| Site name: | AA085642_17_26 |
|---|
| Site flanking region: | TCCGCCTCCCGGGTTCAAGCAGTTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCA
CCACGCCTGGCTAATTTTTGTATTTTTAGTaGAGACGGGTTCCACCATGTTGGCCAGGCTGGTCTCCAAC
TCCTGACCTCAAATGATCCACCCACCTAGGCCTCCCAAAGTGCTGGGATTACAGGAGTGAG |
|---|
| Alignment of AA085642_17_26 to gnl|alu|HSU14573 |
1 tccgcctcccgggttcaagcagttctcctgcctcagcctcctgagtagctgggattacag 60
|||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
217 tccgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggattacag 158
61 gcatgtgccaccacgcctggctaatttttgtatttttagtagagacggg-ttccaccatg 119
|| ||||||||||| ||||||||||||||||||||||||||||||| || |||||||
157 gcgcccgccaccacgcccggctaatttttgtatttttagtagagacggggtttcaccatg 98
120 ttggccaggctggtctccaactcctgacctcaaatgatccacccacctaggcctcccaaa 179
||||||||||||||||| |||||||||||||| |||||||||| ||| |||||||||||
97 ttggccaggctggtctcgaactcctgacctcaggtgatccacccgcctcggcctcccaaa 38
180 gtgctgggattacaggagtgag 201
|||||||||||||||| |||||
37 gtgctgggattacaggcgtgag 16
| Site name: | AA085642_17_52 |
|---|
| Site flanking region: | TCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCACCACGCCTGGCTAATTTTTGTATTT
TTAGTAGAGACGGGTTCCACCATGTTGGCCaGGCTGGTCTCCAACTCCTGACCTCAAATGATCCACCCAC
CTAGGCCTCCCAAAGTGCTGGGATTACAGGAGTGAGCCACCGTGCCCAGCCTTGCCCTGCT |
|---|
| Alignment of AA085642_17_52 to gnl|alu|HSU14573 |
1 tcctgcctcagcctcctgagtagctgggattacaggcatgtgccaccacgcctggctaat 60
|||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||
192 tcctgcctcagcctcccgagtagctgggattacaggcgcccgccaccacgcccggctaat 133
61 ttttgtatttttagtagagacggg-ttccaccatgttggccaggctggtctccaactcct 119
|||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||
132 ttttgtatttttagtagagacggggtttcaccatgttggccaggctggtctcgaactcct 73
120 gacctcaaatgatccacccacctaggcctcccaaagtgctgggattacaggagtgagcca 179
||||||| |||||||||| ||| ||||||||||||||||||||||||||| ||||||||
72 gacctcaggtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagcca 13
180 ccgtgccc 187
||| ||||
12 ccgcgccc 5
| Site name: | AA085642_17_86 |
|---|
| Site flanking region: | GGCATGTGCCACCACGCCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGTTCCACCATGTTGGCCAGGC
TGGTCTCCAACTCCTGACCTCAAATGATCCaCCCACCTAGGCCTCCCAAAGTGCTGGGATTACAGGAGTG
AGCCACCGTGCCCAGCCTTGCCCTGCTTTCTAGGAGATGGAGTTTTCTGAATTTTTCTGTA |
|---|
| Alignment of AA085642_17_86 to gnl|alu|HSU14573 |
8 gccaccacgcctggctaatttttgtatttttagtagagacggg-ttccaccatgttggcc 66
||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||
151 gccaccacgcccggctaatttttgtatttttagtagagacggggtttcaccatgttggcc 92
67 aggctggtctccaactcctgacctcaaatgatccacccacctaggcctcccaaagtgctg 126
||||||||||| |||||||||||||| |||||||||| ||| |||||||||||||||||
91 aggctggtctcgaactcctgacctcaggtgatccacccgcctcggcctcccaaagtgctg 32
127 ggattacaggagtgagccaccgtgccc 153
|||||||||| ||||||||||| ||||
31 ggattacaggcgtgagccaccgcgccc 5
| Site name: | AA085642_17_104 |
|---|
| Site flanking region: | TGGCTAATTTTTGTATTTTTAGTAGAGACGGGTTCCACCATGTTGGCCAGGCTGGTCTCCAACTCCTGAC
CTCAAATGATCCACCCACCTAGGCCTCCCAaAGTGCTGGGATTACAGGAGTGAGCCACCGTGCCCAGCCT
TGCCCTGCTTTCTAGGAGATGGAGTTTTCTGAATTTTTCTGTATTTAGGTTTTCTGTACTA |
|---|
| Alignment of AA085642_17_104 to gnl|alu|HSU14573 |
2 ggctaatttttgtatttttagtagagacggg-ttccaccatgttggccaggctggtctcc 60
||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
139 ggctaatttttgtatttttagtagagacggggtttcaccatgttggccaggctggtctcg 80
61 aactcctgacctcaaatgatccacccacctaggcctcccaaagtgctgggattacaggag 120
|||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||| |
79 aactcctgacctcaggtgatccacccgcctcggcctcccaaagtgctgggattacaggcg 20
121 tgagccaccgtgccc 135
|||||||||| ||||
19 tgagccaccgcgccc 5
| Site name: | AA085642_17_105 |
|---|
| Site flanking region: | GGCTAATTTTTGTATTTTTAGTAGAGACGGGTTCCACCATGTTGGCCAGGCTGGTCTCCAACTCCTGACC
TCAAATGATCCACCCACCTAGGCCTCCCAAaGTGCTGGGATTACAGGAGTGAGCCACCGTGCCCAGCCTT
GCCCTGCTTTCTAGGAGATGGAGTTTTCTGAATTTTTCTGTATTTAGGTTTTCTGTACTAT |
|---|
| Alignment of AA085642_17_105 to gnl|alu|HSU14573 |
1 ggctaatttttgtatttttagtagagacggg-ttccaccatgttggccaggctggtctcc 59
||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
139 ggctaatttttgtatttttagtagagacggggtttcaccatgttggccaggctggtctcg 80
60 aactcctgacctcaaatgatccacccacctaggcctcccaaagtgctgggattacaggag 119
|||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||| |
79 aactcctgacctcaggtgatccacccgcctcggcctcccaaagtgctgggattacaggcg 20
120 tgagccaccgtgccc 134
|||||||||| ||||
19 tgagccaccgcgccc 5
| Site name: | AA085642_17_117 |
|---|
| Site flanking region: | TATTTTTAGTAGAGACGGGTTCCACCATGTTGGCCAGGCTGGTCTCCAACTCCTGACCTCAAATGATCCA
CCCACCTAGGCCTCCCAAAGTGCTGGGATTaCAGGAGTGAGCCACCGTGCCCAGCCTTGCCCTGCTTTCT
AGGAGATGGAGTTTTCTGAATTTTTCTGTATTTAGGTTTTCTGTACTATTTTTTGTCCACT |
|---|
| Alignment of AA085642_17_117 to gnl|alu|HSU14573 |
1 tatttttagtagagacggg-ttccaccatgttggccaggctggtctccaactcctgacct 59
||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||
127 tatttttagtagagacggggtttcaccatgttggccaggctggtctcgaactcctgacct 68
60 caaatgatccacccacctaggcctcccaaagtgctgggattacaggagtgagccaccgtg 119
|| |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||| |
67 caggtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcg 8
120 ccc 122
|||
7 ccc 5
| Site name: | AA085642_17_119 |
|---|
| Site flanking region: | TTTTTAGTAGAGACGGGTTCCACCATGTTGGCCAGGCTGGTCTCCAACTCCTGACCTCAAATGATCCACC
CACCTAGGCCTCCCAAAGTGCTGGGATTACaGGAGTGAGCCACCGTGCCCAGCCTTGCCCTGCTTTCTAG
GAGATGGAGTTTTCTGAATTTTTCTGTATTTAGGTTTTCTGTACTATTTTTTGTCCACTTG |
|---|
| Alignment of AA085642_17_119 to gnl|alu|HSU14573 |
1 tttttagtagagacggg-ttccaccatgttggccaggctggtctccaactcctgacctca 59
||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||
125 tttttagtagagacggggtttcaccatgttggccaggctggtctcgaactcctgacctca 66
60 aatgatccacccacctaggcctcccaaagtgctgggattacaggagtgagccaccgtgcc 119
|||||||||| ||| ||||||||||||||||||||||||||| ||||||||||| |||
65 ggtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcc 6
120 c 120
|
5 c 5
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | BM050571,BG107684,AK026618,BI457481,NM022101,BF807715,BI161144,BI093850,BM916055,AA330297,BI089416,BM010397,BM557169,BX327120,AK096297,AW962522,BM553330 |
|---|
| Multiple alignment | CCAGGAT.GGA.GT.GCAGTGGTGC..GATCTC.GGCTCACT.GCAACC.TCCGCCTCCC Chrom.X NT_077819
------------------------------------------------------------ BM050571
------------------------------------------------------------ BG107684
CCAGGAT.GGA.GT.GCAGTGGTGC..GATCTC.GGCTCACT.GCAACC.TCCGCCTCCC AK026618
-----------------------GC..GATCTC.GGCTCACT.GCAACC.TCCGCCTCCC BI457481
CCAGGAT.GGA.GT.GCAGTGGTGC..GATCTC.GGCTCACT.GCAACC.TCCGCCTCCC NM022101
------------------------------------------------------------ BF807715
-----------------------------TCTC.GGCTCACT.GCAACC.TCCGCCTCCC BI161144
----GCT.GGA.GT.GCA.AGG.GCATGGTCTG.GGCTCACT.GCAACC.TCACCCTCCC BI093850
------------------------------------------------------------ BM916055
CCAGGAT.GGA.GT.GCAGTGGTGC..GGTCTC.GGCTCACT.GCAGCC.TCCGCCTCCC AA330297
CCAGGATGGGATGTGGCAGGGGTGC.AGATCTCGGGCTCACTGGGAACCATCGGCATCCC BI089416
------------------------------------------------------------ BM010397
------------------------------------------------------------ BM557169
CCAGGAT.GGA.GT.GCAGTGGTGC..GATCTC.GGCTCACT.GCAACC.TCCGCCTCCC BX327120
CCAGGAT.GGA.GT.GCAGTGGTGC..GATCTC.GGCTCGCT.GCAACC.TCCGCCTCCC AK096297
CCAGGAT.GGA.GT.GCAGTGGTGC..GGTCTC.GGCTCACT.GCAGCC.TCCGCCTCCC AW962522
------------------------------------------------------------ BM553330
.GGGTTC.AAGCAGTT.CT.CC.TGC.CTCAGCCTCCTGAGTAGCTGGGATTACAGGCAT Chrom.X NT_077819
---------------------------------------AGTAGCTGGGATTACAGGCAT BM050571
------------------------------------------------------------ BG107684
.GGGTTC.GGGCAGTT.CT.CC.TGC.CTCAGCCTCCTGAGTAGCTGGGATTACGGGCAT AK026618
.GGGTTC.AGGCAGTT.CT.CC.TGC.CTCAGCCTCCTGAGTAGCTGGGATTACAGGCAT BI457481
.GGGTTC.GGGCAGTT.CT.CC.TGC.CTCAGCCTCCTGAGTAGCTGGGATTACGGGCAT NM022101
------------------------------------------------------------ BF807715
.GGGTTC.AGGCAGTT.CT.CC.TGC.CTCAGCCTCCTGAGTAGCTGGGATTACAGGCAT BI161144
.AGGTTC.AAGCGATT.CT.CCGTGC.CTCAGCCTCCCAAGTAGCTGGGATTACAGGCAC BI093850
------------------------------------------------------------ BM916055
.GGGTTC.GGGCAGTT.CT.CC.TGC.CTCAGCCTCCTGAGTGGCTGGGATTGCAGGCAT AA330297
GGGGTTCAGGGCAGTTACTACCGGGCACTAAGCCTCCTGAGAAGCGGGGATAACGGGCTT BI089416
------------------------------------------------------------ BM010397
------------------------------------------------------------ BM557169
.GGGTTC.AAGCAGTT.CT.CC.TGC.CTCAGCCTCCTGAGTGGCTGGGATTACAGGCAT BX327120
.GGGTTC.GGGCAGTT.CT.CC.TGC.CTCAGCCTCCTGAGTGGCTGGGATTGCAGGCAT AK096297
.GGGTTC.GGGCAGTT.CT.CC.TGC.CTCAGCCTCCTGAGTGGCTGGGATTGCAGGCAT AW962522
------------------------------------------------------------ BM553330
GTGCCACCACGCCTGGC.TAATTTTTGTATTTT.TAGTAGAGACGG.GTTCCACCATGTT Chrom.X NT_077819
GTGCCACCACGCCTGGC.TAATTTT.GTA.TTT.TAGTGGAGACGG.GTTCCACCATGTT BM050571
--------------------------GTATTTT.TAGTGGAGACGG.GTTCCACCATGTT BG107684
GTGCCACCACGC AK026618
GTGCCACCACGCCTGGC.TAATTTTTGTATTTT.TAGTAGAGGCGG.GTTCCACCGTGTT BI457481
GTGCCACCACGC NM022101
-----------------------------------------------GTTTC.CCGTGTT BF807715
GTGCCACCACGCCTGGC.TAATTTT.GTATTTT.TAGTAGAGGCGG.GTTCCACCGTGTT BI161144
CCACCACCATGCCTAGC.TAATTTTGGTATTTTATAGTAGAGACGGAGTTTCACCGTGTG BI093850
------------------------------------------------------------ BM916055
GT++++++++++ AA330297
GTGCCACCACGCCGGGCATAAT++++++++++++++++++++++++++++++++++++++ BI089416
------------------------------------------------------------ BM010397
------------------------------------------------------------ BM557169
GTGCCACCACGCCTGGC.TAATTTTTGTATTTT.TAGTGGAGACGG.GTTCCACCATGTT BX327120
GTGCCACCACGCCTGGC.TAATTTTTGTATTTT.TGGTGGAGACGG.GTTCCACCATGTT AK096297
GTGCCGCCACGCCTGGC.TAATTTTTGTATTTT.TAGTGGAGACGG.GTTCCACCATGTT AW962522
------------------------------------------------------------ BM553330
GGCCAGGCTGGTCTCCAACTCCTGACCTCAAATGATCCACCCACCTAGGCCTCCCAAAGT Chrom.X NT_077819
GGCCAGGCTGGTCTCCAACTCCTGACCTCAAATGATCCACCCACCTAGGCCTCCCAAGGT BM050571
GGCCAGGCTGGTCTCCAACTCCTGACCTCAAATGATCCACCCACCTAGGCCTCCCAAAGT BG107684
AK026618
GGCCAGGCTGGTCTCCAACTCCTGACCTCAAATGATCCACCCACCTAGGCCTCCC.AGGT BI457481
NM022101
GGTCAGGCTGGTCTCAGACTCCCGATCTCAGGTGATCCGCCCGCCTCGGCCTCCCAAAGT BF807715
GGCCAGGCTGGTCTCCAACTCCTGACCTCAAATGATCCACCCACCTAGGCCTCCCAGGGT BI161144
GGCCAGGCTGGTCTTGAACTCCTGAGCTCAGGTGATCCACCTGCCTGGGCCTTCTAAAGT BI093850
--------------------------------------------CTAGGCCTCCC.AAGT BM916055
AA330297
--------------------------------------------CTAGGCCTCCCAAAGT BM010397
----------------------------------------------AGGCCTCCC.AAGT BM557169
GGCCAGGCTGGACTCCAACTCCTGACCTCAAATGATCCACCCACCTAGGCCTACCAAGGT BX327120
GGCCAGGCTGGTCTCCAACTCCTGACCTCAAATGATCCGCCCACCTAGGCCTCCCAAGGT AK096297
GGCCGGGCTGGTCTTCAACTCCTGACCTCAGGTGATCCACCCACCTAGGCCTCCCCGGGT AW962522
----------------------------------------------AGGCCTCCC.AAGT BM553330
GCTGGGATTACAGGAGTGAGCCACCGTGCCCAGCC.TTGCCCTGCTTTCTAG Chrom.X NT_077819
GCTGGGATTACGGGAGTGAGCCACCGTGCCCAGCC.TTGCCCTGCTTTCTAG BM050571
GCTGGGATTGCAGGAGTGAGCCACCGTGCCCAGCC.TTGCCCTGCTTTCTAG BG107684
AK026618
GCTGGGATTGCAGGAGTGAGCCACCGTGCCCAGCC.TTGCCCTGCTTTCTAG BI457481
NM022101
GCTGGGATTACAGGAGTGAGCCACCGTGCCCAGCC.TTGCCCTGCTTTCTAG BF807715
GCTGGGATTGCAGGAGTGAGCCACCGTGCCCAGCC.TTGCCCTGCTTTCTAG BI161144
GCTGGGATTACAGGTGTGAGCCACCGTGCCGGGCC.TT++++++++++++++ BI093850
GCTGGGATTGCAGGAGTGAGCCACCGTGCCCAGCC.TTGCCCTGCTTTCTAG BM916055
AA330297
GCTGGGA.TGCAGGAGTGAGCCACCGTGCCCAGCC.TTGCCCTGCTTTCTAG BM010397
GCTGGGATTGCAGGAGTGAGCCACCGTGCCCAGCC.TTGCCCTGCTTTCTAG BM557169
GCTGGGATTGCAGGAGTGAGCCACCGTGCCCAGCC.TTGCCCTGCTTTGTAG BX327120
GCTGGGATTGCAGGAGTGAGCCACCGTGCCCAGCC.TTGCCCTGCTTTCTAG AK096297
GCTGGGATTGGAGGA.TGAGCCACCGTGCCCAGCCTTTGCCTTG.TTTTTAA AW962522
GCTGGGATTGCAGGAGTGAGCCACCGTGCCCAGCC.TTGCCCTGCTTTCTAG BM553330
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| Sites: | AA085642_17_702 AA085642_17_703 AA085642_17_734 Cytogenetic band: Xq24 |
|---|
| Site name: | AA085642_17_702 |
|---|
| Site flanking region: | AAAAGCCAGATTGCAGTGAGTGGGTAGGACAGCTCAGATCCAAATGAAAGTAGGGTCTCAAGTAACCCAA
GGGTGGCCGGGTACGGTGGCTCACGCCTGTaATCCTAGCAGTTTGGGAGGCAGAGGCGGGCAGATTGCCT
GAGCTCAGGAGTTTGAGACCAGCCTGGGCAACATGGTGAAACCCTGTCTCTACTAAAATAC |
|---|
| Alignment of AA085642_17_702 to gnl|alu|HSU14574 |
75 ggccgggtacggtggctcacgcctgtaatcctagcagtttgggaggcagaggcgggcaga 134
||||||| |||||||||||||||||||||| |||| |||||||||| ||||||||| ||
1 ggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcgga 60
135 ttgcctgagctcaggagtttgagaccagcctgggcaacatggtgaaaccctgtctctact 194
| |||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||
61 tcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctact 120
195 aaaa 198
||||
121 aaaa 124
| Site name: | AA085642_17_703 |
|---|
| Site flanking region: | AAAGCCAGATTGCAGTGAGTGGGTAGGACAGCTCAGATCCAAATGAAAGTAGGGTCTCAAGTAACCCAAG
GGTGGCCGGGTACGGTGGCTCACGCCTGTAaTCCTAGCAGTTTGGGAGGCAGAGGCGGGCAGATTGCCTG
AGCTCAGGAGTTTGAGACCAGCCTGGGCAACATGGTGAAACCCTGTCTCTACTAAAATACA |
|---|
| Alignment of AA085642_17_703 to gnl|alu|HSU14574 |
74 ggccgggtacggtggctcacgcctgtaatcctagcagtttgggaggcagaggcgggcaga 133
||||||| |||||||||||||||||||||| |||| |||||||||| ||||||||| ||
1 ggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcgga 60
134 ttgcctgagctcaggagtttgagaccagcctgggcaacatggtgaaaccctgtctctact 193
| |||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||
61 tcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctact 120
194 aaaa 197
||||
121 aaaa 124
| Site name: | AA085642_17_734 |
|---|
| Site flanking region: | GCTCAGATCCAAATGAAAGTAGGGTCTCAAGTAACCCAAGGGTGGCCGGGTACGGTGGCTCACGCCTGTA
ATCCTAGCAGTTTGGGAGGCAGAGGCGGGCaGATTGCCTGAGCTCAGGAGTTTGAGACCAGCCTGGGCAA
CATGGTGAAACCCTGTCTCTACTAAAATACAAAAGAAATTAGCCAGGTGTGGCGGCATACC |
|---|
| Alignment of AA085642_17_734 to gnl|alu|HSU14574 |
44 ggccgggtacggtggctcacgcctgtaatcctagcagtttgggaggcagaggcgggcaga 103
||||||| |||||||||||||||||||||| |||| |||||||||| ||||||||| ||
1 ggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcgga 60
104 ttgcctgagctcaggagtttgagaccagcctgggcaacatggtgaaaccctgtctctact 163
| |||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||
61 tcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctact 120
164 aaaa-tacaaaa 174
|||| |||||||
121 aaaaatacaaaa 132
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | BM049831,BE745496,BM046530,BQ936325,BQ223241,BI457481,BM049087,BF974463,BQ931046,BQ945475,BM047230,BQ928476,BQ944963,AW886180,BM916055,BM010397,BM557169,AK096297,BQ958780,BM046674,BM553330 |
|---|
| Multiple alignment | AGTAACCCAAGGGTGGCCGGGTACGGTGGCTCACGCCTGTAATCCT.AGCAGTTTGGGAG Chrom.X NT_077819
------------------------------------------------------------ BM049831
AGTAACCCAAGGGTGGCCGGGTACGGTGGCTCACGCCTGTGGTCCT.AGCAGTTTGGGAG BE745496
------------------------------------------------------------ BM046530
------------------------------------------------------------ BQ936325
AGTAACCCAAGGGTGGCCGGGTACGGTGGCTCACGCCTGTGGTCCT.AGCAGTTTGGGAG BQ223241
AGTAA.CCAAGGGTGGCCGGGTACGGTGGCTCACGCCTGTAGTCCTAACCAG.TTGGGAG BI457481
------------------------------------------------------------ BM049087
AGTAACCCAAGGGTGGCCGGGTACGGTGGCTCACGCCTGTGGTCCT.AGCAGTTTGGGAG BF974463
------------------------------------------------------------ BQ931046
------------------------------------------------------------ BQ945475
------------------------------------------------------------ BM047230
------------------------------------------------------------ BQ928476
------------------------------------------------------------ BQ944963
AGTAACCCAAGGGTGGCCGGGTACGGTGGCTCACGCCTGTGGTCCT.AGCAGTTTGGGAG AW886180
AGTAACCCAAGGGTGGCCGGGTACGGTGGCTCACGCCTGTGGTCCT.AGCAGTTTGGGAG BM916055
AGTAACCCAAGGGTGGCCGGGTACGGTGGCTCACGCCTGTGGTCCT.AGCAGTTTGGGAG BM010397
AGTAACCCAAGGGTGGCCGGGTACGGTGGCTCACGCCTGTGGTCCT.AGCAGTTTGGGAG BM557169
AGTAACCCAAGGGTGGCCGGGTACGGTGGCTCACGCCTGTGGTCCT.AGCAGTTTGGGAG AK096297
------------------------------------------------------------ BQ958780
------------------------------------------------------------ BM046674
AGTAACCCAAGGGTGGCCGGGTACGGTGGCTCACGCCTGTGGTCCT.AGCAGTTTGGGAG BM553330
GCAGAGGCGGGCAGATTGCCTG.AGCTCAG.GAGTTTGAGACCAGC Chrom.X NT_077819
GCAGAGGTGGGCGGATTGCCTG.GGCTCAG.GAGTTTGAGACCAGC BM049831
GCAGAGGTGGGCAGATTGCCTG.AGCTCAG.GAGTTTGAGACCAGC BE745496
GCAGAGGTGGGCGGATTGCCTG.GGCTCAG.GAGTTTGAGACCAGC BM046530
---GAGGTGGGCGGATTGCCTG.GGCTCAG.GAGTTTGAGACCAGC BQ936325
GCAGAGGTGGGCAGATTGCCTG.AGCTCGG.GAGTTTGAGACCAGC BQ223241
GCAGACGTGGCCAGATTGCCTGCACCTCAGCGACGTTGAGAC++++ BI457481
GCAGAGGTGGGCGGATTGCCTG.GGCTCAG.GAGTTTGAGACCAGC BM049087
GCAGAGGCGGGCGGATTGCCTG.GGCTCAG.GAGTTTGAGACCAGC BF974463
---GAGGTGGGCGGATTGCCTG.GGCTCAG.GAGTTTGAGACCAGC BQ931046
---GAGGTGGGCGGATTGCCTG.GGCTCAG.GAGTTTGAGACCAGC BQ945475
GCAGAGGTGGGCGGATTGCCTG.GGCTCAG.GAGTTTGAGACCAGC BM047230
---GAGGTGGGCGGATTGCCTG.GGCTCAG.GAGTTTGAGACCAGC BQ928476
---GAGGTGGGCGGATTGCCTG.GGCTCAG.GAGTTTGAGACCAGC BQ944963
GCAGAGGTGGGCAGATTGCCTG.AGCTCAG.GAGTTTGAGACCAGC AW886180
GCAGAGGCGGGCAGATTGCCTG.AGCTCAG.GAGTTTGAGACCAGC BM916055
GCAGAGGCGGGCAGATTGCCTG.AGCTCAG.GAGTTTGAGACCAGC BM010397
GCAGAGGCGGGCAGATTGCCTG.AGCTCAN.GAGTTTGAGACCAGC BM557169
GCAGAGGCGGGCGGATTGCCTG.AGCTCAG.GAGTTTGAGACCAGC AK096297
---GAGGTGGGCGGATTGCCTG.GGCTCAG.GAGTTTGAGACCAGC BQ958780
GCAGAGGTGGGCGGATTGCCTG.GGCTCAG.GAGTTTGAGACCAGC BM046674
GCAGAGGCGGGCAGATTGCCTG.AGCTCAG.GAGTTTGAGACCAGC BM553330
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| Sites: | AA085642_18_8 AA085642_18_33 AA085642_18_39 Cytogenetic band: Xq24 |
|---|
| Site name: | AA085642_18_8 |
|---|
| Site flanking region: | GGGTGGCCGGGTACGGTGGCTCACGCCTGTAATCCTAGCAGTTTGGGAGGCAGAGGCGGGCAGATTGCCT
GAGCTCAGGAGTTTGAGACCAGCCTGGGCAaCATGGTGAAACCCTGTCTCTACTAAAATACAAAAGAAAT
TAGCCAGGTGTGGCGGCATACCCCTGTAGTCACGGCTACTTGGGAGGCAGAGGCAGGAGAA |
|---|
| Alignment of AA085642_18_8 to gnl|alu|HSU14574 |
5 ggccgggtacggtggctcacgcctgtaatcctagcagtttgggaggcagaggcgggcaga 64
||||||| |||||||||||||||||||||| |||| |||||||||| ||||||||| ||
1 ggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcgga 60
65 ttgcctgagctcaggagtttgagaccagcctgggcaacatggtgaaaccctgtctctact 124
| |||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||
61 tcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctact 120
125 -aaaatacaaaagaaattagccaggtgtggcggcatacccctgtagtcacggctacttgg 183
||||||||| ||||||||| || |||| ||| | |||||| || | |||||| ||
121 aaaaatacaa---aaattagccgggcgtggtggcgcgcgcctgtaatcccagctactcgg 180
184 gaggcagaggcaggagaa 201
||||| ||||||||||||
181 gaggctgaggcaggagaa 198
| Site name: | AA085642_18_33 |
|---|
| Site flanking region: | CCTGTAATCCTAGCAGTTTGGGAGGCAGAGGCGGGCAGATTGCCTGAGCTCAGGAGTTTGAGACCAGCCT
GGGCAACATGGTGAAACCCTGTCTCTACTAaAATACAAAAGAAATTAGCCAGGTGTGGCGGCATACCCCT
GTAGTCACGGCTACTTGGGAGGCAGAGGCAGGAGAATTGCTTGAACTCGGGAGGTGGAGGT |
|---|
| Alignment of AA085642_18_33 to gnl|alu|HSU14574 |
1 cctgtaatcctagcagtttgggaggcagaggcgggcagattgcctgagctcaggagtttg 60
|||||||||| |||| |||||||||| ||||||||| ||| |||||| ||||||||| |
22 cctgtaatcccagcactttgggaggccgaggcgggcggatcacctgaggtcaggagttcg 81
61 agaccagcctgggcaacatggtgaaaccctgtctctact-aaaatacaaaagaaattagc 119
|||||||||||| |||||||||||||||| ||||||||| ||||||||| ||||||||
82 agaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaa---aaattagc 141
120 caggtgtggcggcatacccctgtagtcacggctacttgggaggcagaggcaggagaattg 179
| || |||| ||| | |||||| || | |||||| ||||||| ||||||||||||| |
142 cgggcgtggtggcgcgcgcctgtaatcccagctactcgggaggctgaggcaggagaatcg 201
180 cttgaactcgggaggtggaggt 201
||||||| ||||||| ||||||
202 cttgaacccgggaggcggaggt 223
| Site name: | AA085642_18_39 |
|---|
| Site flanking region: | TAATCCTAGCAGTTTGGGAGGCAGAGGCGGGCAGATTGCCTGAGCTCAGGAGTTTGAGACCAGCCTGGGC
AACATGGTGAAACCCTGTCTCTACTAAAATaCAAAAGAAATTAGCCAGGTGTGGCGGCATACCCCTGTAG
TCACGGCTACTTGGGAGGCAGAGGCAGGAGAATTGCTTGAACTCGGGAGGTGGAGGTTGCA |
|---|
| Alignment of AA085642_18_39 to gnl|alu|HSU14574 |
1 taatcctagcagtttgggaggcagaggcgggcagattgcctgagctcaggagtttgagac 60
|||||| |||| |||||||||| ||||||||| ||| |||||| ||||||||| |||||
26 taatcccagcactttgggaggccgaggcgggcggatcacctgaggtcaggagttcgagac 85
61 cagcctgggcaacatggtgaaaccctgtctctact-aaaatacaaaagaaattagccagg 119
|||||||| |||||||||||||||| ||||||||| ||||||||| ||||||||| ||
86 cagcctggccaacatggtgaaaccccgtctctactaaaaatacaa---aaattagccggg 145
120 tgtggcggcatacccctgtagtcacggctacttgggaggcagaggcaggagaattgcttg 179
|||| ||| | |||||| || | |||||| ||||||| ||||||||||||| |||||
146 cgtggtggcgcgcgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttg 205
180 aactcgggaggtggaggttgca 201
||| ||||||| ||||||||||
206 aacccgggaggcggaggttgca 227
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | BM049831,BQ945475,BM047230,BQ928476,BQ944963,BM046530,AW886180,BM916055,BM010397,AK026618,BM557169,BQ936325,BQ223241,AK096297,BM049087,BM046674,BQ958780,BM553330,BQ931046,BF974463,NM022101 |
|---|
| Multiple alignment | CTGGG.CAACATGGTGAAACCCTGTCTCTACTAA.A.ATACAAAAGAAATTAGCCA.GGT Chrom.X NT_077819
CTGGG.CAACGTGGTGAAACCCTGTCTCTACTAG.A.ATACAAAAGAAATTGGCCA.GGT BM049831
CTGGG.CAACGTGGTGAAACCCTGTCTCTACTAG.A.ATACAAAAGAAATTGGCCA.GGA BQ945475
CTGGG.CAACGTGGTGAAACCCTGTCTCTACTAG.A.ATACAAAAGAAATTGGCCA.GGT BM047230
CTGGG.CAACGTGGTGAAACCCTGTCTCTACTAG.A.ATACAAAAGAAATTGGCCA.GGT BQ928476
CTGGG.CAACGTGGTGAAACCCTGTCTCTACTAG.A.ATACAAAAGAAATTGGCCA.GGT BQ944963
CTGGG.CAACGTGGTGAAACCCTGTCTCTACTAG.A.ATACAAAAGAAATTGGCCA.GGT BM046530
CTGGG.CAGCATGGTGAAACCCTGTCTCTACTAA.A.ATGCAAAAGAGATTAGCCA.GGT AW886180
CTGGG.CAGCATGGTGAAACCCTGTCTCTACTAA.A.ATACAAAAGAAATTAGCCAGGGT BM916055
CTGGGCCAGCATGGTGAAACCCTGTCTCTACTAA.A.ATACAAAAGAAATTAGCCA.GGT BM010397
CTGGG.CAACATGGTGAAACCCTGTCTCTACT.G.AAATACAAAAGAAATTAGCCA.GGT AK026618
CTGNG.CAGCATGGTGAAACCCTGTCTCTACTAN.N.ATACAAAAGAAATTAGCCA.GGT BM557169
CTGGG.CAACGTGGTGAAACCCTGTCTCTACTAG.A.ATACAAAAGAAATTGGCCA.GGT BQ936325
CTGGG.CAGCATGGTGAAACCCTGTCTCTACT.GAA.ATACAAAAGAAATTAGCCA.GGT BQ223241
CTGGG.CAACATGGTGAAACCCTGTCTCTACTAG.A.ATGCAAAAGAAATTAGCCA.GGT AK096297
CTGGG.CAACGTGGTGAAACCCTGTCTCTACTAG.A.ATACAAAAGAAATTGGCCA.GGT BM049087
CTGGG.CAACGTGGTGAAACCCTGTCTCTACTAG.A.ATACAAAAGAAATTGGCCA.GGT BM046674
CTGGG.CAACGTGGTGAAACCCTGTCTCTACTAG.A.ATACAAAAGAAATTGGCCA.GGT BQ958780
CTGGG.CAGCATGGTGAAACCCTGTCTCTACTAA.A.ATACAAAAGAAATTAGCCA.GGT BM553330
CTGGG.CAACGTGGTGAAACCCTGTCTCTACTAG.A.ATACAAAAGAAATTGGCCA.GGT BQ931046
CTGGG.CAGCATGGTGAAACCCTGTCTCTACTA..AGATACAAAAGAAATTGGCCA.GGT BF974463
CTGGG.CAACATGGTGAAACCCTGTCTCTACT.G.AAATACAAAAGAAATTAGCCA.GGT NM022101
GTG Chrom.X NT_077819
GTG BM049831
GTG BQ945475
GTG BM047230
GTG BQ928476
GTG BQ944963
GTG BM046530
GT. AW886180
GTG BM916055
GTG BM010397
GTG AK026618
GTG BM557169
GTG BQ936325
GTG BQ223241
GTG AK096297
GTG BM049087
GTG BM046674
GTG BQ958780
GTG BM553330
GTG BQ931046
GTG BF974463
GTG NM022101
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| Sites: | AA085642_19_49 AA085642_19_58 AA085642_19_83 AA085642_19_90 Cytogenetic band: Xq24 |
|---|
| Site name: | AA085642_19_49 |
|---|
| Site flanking region: | ACATGGTGAAACCCTGTCTCTACTAAAATACAAAAGAAATTAGCCAGGTGTGGCGGCATACCCCTGTAGT
CACGGCTACTTGGGAGGCAGAGGCAGGAGAaTTGCTTGAACTCGGGAGGTGGAGGTTGCAGTGAGCTGAG
ATTGCACCACTGTACTCCAGCACTCCAGCCTGGGCGACAGAGTGAGACTCTGTCTCTACAA |
|---|
| Alignment of AA085642_19_49 to gnl|alu|HSU14574 |
1 acatggtgaaaccctgtctctactaaaa-tacaaaagaaattagccaggtgtggcggcat 59
|||||||||||||| ||||||||||||| ||||||| ||||||| || |||| |||
97 acatggtgaaaccccgtctctactaaaaatacaaaa---attagccgggcgtggtggcgc 156
60 acccctgtagtcacggctacttgggaggcagaggcaggagaattgcttgaactcgggagg 119
| |||||| || | |||||| ||||||| ||||||||||||| |||||||| |||||||
157 gcgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggagg 216
120 tggaggttgcagtgagctgagattgcaccactgtactccagcactccagcctgggcgaca 179
|||||||||||||||| ||||| || ||||| ||||||||||||||||||||
217 cggaggttgcagtgagccgagatcgcgccact--------gcactccagcctgggcgaca 276
180 gagtgagactctgtctc 196
||| ||||||| |||||
277 gagcgagactccgtctc 293
| Site name: | AA085642_19_58 |
|---|
| Site flanking region: | AACCCTGTCTCTACTAAAATACAAAAGAAATTAGCCAGGTGTGGCGGCATACCCCTGTAGTCACGGCTAC
TTGGGAGGCAGAGGCAGGAGAATTGCTTGAaCTCGGGAGGTGGAGGTTGCAGTGAGCTGAGATTGCACCA
CTGTACTCCAGCACTCCAGCCTGGGCGACAGAGTGAGACTCTGTCTCTACAAAAAAAAAAA |
|---|
| Alignment of AA085642_19_58 to gnl|alu|HSU14571 |
54 cctgtagtcacggctacttgggaggcagaggcaggagaattgcttgaactcgggaggtgg 113
||||||||| | |||||| ||||||| ||||||||||||| |||||||| ||||||| ||
155 cctgtagtcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcgg 214
114 aggttgcagtgagctgagattgcaccactgtactccagc 152
|||||||||||||| ||||| || |||||| ||||||||
215 aggttgcagtgagccgagatcgcgccactgcactccagc 253
| Site name: | AA085642_19_83 |
|---|
| Site flanking region: | AAGAAATTAGCCAGGTGTGGCGGCATACCCCTGTAGTCACGGCTACTTGGGAGGCAGAGGCAGGAGAATT
GCTTGAACTCGGGAGGTGGAGGTTGCAGTGaGCTGAGATTGCACCACTGTACTCCAGCACTCCAGCCTGG
GCGACAGAGTGAGACTCTGTCTCTACAAAAAAAAAAAAAAAAAAAAGTAACCCAAGGGAGG |
|---|
| Alignment of AA085642_19_83 to gnl|alu|HSU14571 |
30 cctgtagtcacggctacttgggaggcagaggcaggagaattgcttgaactcgggaggtgg 89
||||||||| | |||||| ||||||| ||||||||||||| |||||||| ||||||| ||
155 cctgtagtcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcgg 214
90 aggttgcagtgagctgagattgcaccactgtactccagc 128
|||||||||||||| ||||| || |||||| ||||||||
215 aggttgcagtgagccgagatcgcgccactgcactccagc 253
| Site name: | AA085642_19_90 |
|---|
| Site flanking region: | TAGCCAGGTGTGGCGGCATACCCCTGTAGTCACGGCTACTTGGGAGGCAGAGGCAGGAGAATTGCTTGAA
CTCGGGAGGTGGAGGTTGCAGTGAGCTGAGaTTGCACCACTGTACTCCAGCACTCCAGCCTGGGCGACAG
AGTGAGACTCTGTCTCTACAAAAAAAAAAAAAAAAAAAAGTAACCCAAGGGAGGGAGCTAC |
|---|
| Alignment of AA085642_19_90 to gnl|alu|HSU14571 |
23 cctgtagtcacggctacttgggaggcagaggcaggagaattgcttgaactcgggaggtgg 82
||||||||| | |||||| ||||||| ||||||||||||| |||||||| ||||||| ||
155 cctgtagtcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcgg 214
83 aggttgcagtgagctgagattgcaccactgtactccagc 121
|||||||||||||| ||||| || |||||| ||||||||
215 aggttgcagtgagccgagatcgcgccactgcactccagc 253
| Genbank sequences that undergo editing in this site(s) |
|---|
| Sequence list: | BM049831,BQ945475,BM047230,BQ928476,BQ944963,BM046530,BM557169,AI818349,BQ936325,BQ223241,BM049087,BM046674,BQ958780,BM553330,BQ931046,BF974463 |
|---|
| Multiple alignment | CCCCTGTAGTCACGGCTACTTGGGAGGCAGAGGCAGGAGAATTGCTTGAACTCGGGAGGT Chrom.X NT_077819
CCCCTGTGGTCACGGCTGCTTGGGGGGCGGAGGCAGGAGAGTTGCTTGAGCTCGGGAGGT BM049831
CCCCTGTGGTCACGGCTGCTTGGGGGGCGGAGGCAGGAGAGTTGCTTGAGCTCGGGAGGT BQ945475
CCCCTGTGGTCACGGCTGCTTGGGGGGCGGAGGCAGGAGAGTTGCTTGAGCTCGGGAGGT BM047230
CCCCTGTGGTCACGGCTGCTTGGGGGGCGGAGGCAGGAGAGTTGCTTGAGCTCGGGAGGT BQ928476
CCCCTGTGGTCACGGCTGCTTGGGGGGCGGAGGCAGGAGAGTTGCTTGAGCTCGGGAGGT BQ944963
CCCCTGTGGTCACGGCTGCTTGGGGGGCGGAGGCAGGAGAGTTGCTTGAGCTCGGGAGGT BM046530
CCCCTGTAGTCACGGCTACTTGGGAGGCAGAGGCANGAGAATTGCTTGAACTCGGGAGGT BM557169
CCCCTGTGGTCACGGCTGCTTGGGAGGCAGAGGCAGGAGGGTTGCTTGAACTCGGGAGGT AI818349
CCCCTGTGGTCACGGCTGCTTGGGGGGCGGAGGCAGGAGAGTTGCTTGAGCTCGGGAGGT BQ936325
CCCCTGTAGTCACGGCTGCTTGGGGGGCAGAGGCAGGAGAATTGCTTGAGCTCGGGAGGT BQ223241
CCCCTGTGGTCACGGCTGCTTGGGGGGCGGAGGCAGGAGAGTTGCTTGAGCTCGGGAGGT BM049087
CCCCTGTGGTCACGGCTGCTTGGGGGGCGGAGGCAGGAGAGTTGCTTGAGCTCGGGAGGT BM046674
CCCCTGTGGTCACGGCTGCTTGGGGGGCGGAGGCAGGAGAGTTGCTTGAGCTCGGGAGGT BQ958780
CCCCTGTAGTCACGGCTACTTGGGAGGCAGAGGCAGGAGAATTGCTTGAACTCGGGAGGT BM553330
CCCCTGTGGTCACGGCTGCTTGGGGGGCGGAGGCAGGAGAGTTGCTTGAGCTCGGGAGGT BQ931046
CCCCTGTAGTCACGGCTGCTTGGGAGGCGGAGGCAGGAGAATTGCTTGAACTCGGGGGGT BF974463
GG.AGGTTGCAGTGAGCTGAGATTGCA Chrom.X NT_077819
GG.AGGTTGCAGTGGGCTGAGATTGCA BM049831
GG.AGGTTGCAGTGGGCTGAGATTGCA BQ945475
GG.AGGTTGCAGTGGGCTGAGATTGCA BM047230
GG.AGGTTGCAGTGGGCTGAGATTGCA BQ928476
GG.AGGTTGCAGTGGGCTGAGATTGCA BQ944963
GG.AGGTTGCAGTGGGCTGAGATTGCA BM046530
GG.AGGTTGCAGTGAGCTGAGGTTGCA BM557169
GG.AGGTTGCGGTGAGCTGAGATTGCA AI818349
GG.AGGTTGCAGTGGGCTGAGATTGCA BQ936325
GG.AGGTTGCGGTGGGCTGAGATTGCA BQ223241
GG.AGGTTGCAGTGGGCTGAGATTGCA BM049087
GG.AGGTTGCAGTGGGCTGAGATTGCA BM046674
GG.AGGTTGCAGTGGGCTGAGATTGCA BQ958780
GGAAGG.TGCANTGAGCTGAGGTTGCA BM553330
GG.AGGTTGCAGTGGGCTGAGATTGCA BQ931046
GGAAGGTTGCAGTGGGCTGAGGTTGCA BF974463
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